Gene detail information of Glyur000313s00016914.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39840.12.00E-173type one serine/threonine protein phosphatase 4
NRXP_004490848.10PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Cicer arietinum]
COGYP_004458109.15.00E-39metallophosphoesterase [Acidianus hospitalis W1]
Swissprottr|P48484|PP14_ARATH0Serine/threonine-protein phosphatase PP1 isozyme 4
trEMBLtr|Q9MB26|Q9MB26_VICFA0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003135924466513+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06269PPP1C EC:3.1.3.16 mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP - PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750
Proteoglycans in cancermap05205
Amphetamine addictionmap05031
Alcoholismmap05034
Insulin resistancemap04931
Herpes simplex infectionmap05168


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000313s00016914.1PF00149.23Metallophos662583.50E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.110
SRR1783600control36.045
SRR1783602moderate drought stress50.705
SRR1811619moderate drought stress50.890

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain55.359
DRR006520Root Summer glycyrrhizin high producing strain54.275
DRR006521Root Winter glycyrrhizin high producing strain75.543
DRR006522Root Winter glycyrrhizin high producing strain49.387
DRR006523Root Summer glycyrrhizin low producing strain56.806
DRR006524Root Summer glycyrrhizin low producing strain58.427
DRR006525Leaf Summer glycyrrhizin high producing strain15.485
DRR006526Leaf Summer glycyrrhizin high producing strain16.154

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.223
SRR2868004Drought Stress(Tissue:root)42.430
SRR2967015Control (Tissue:root)44.151

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.854
SRR9715740Leave28.989
SRR9715741Leave32.751
SRR9715739Root39.438
SRR9715742Root51.071
SRR9715743Root46.688

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.542
SRR8749028MeJA induced 9h16.863
SRR8749029MeJA induced 9h25.794
SRR8749030Uninduced19.319
SRR8749031Uninduced17.915
SRR8749032Uninduced26.004

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root59.605
SRR8400027Control-Root59.142

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved