Gene detail information of Glyur000328s00018340.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G02800.23.00E-120protein kinase 2B
NRXP_006595795.10PREDICTED: protein kinase 2A, chloroplastic-like [Glycine max]
COGYP_001543477.16.00E-23serine/threonine kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|O49839|APK2A_ARATH4.00E-149Protein kinase 2A, chloroplastic (Precursor)
trEMBLtr|I1M792|I1M792_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G04420.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00328153839157660+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000328s00018340.1PF00069.20Pkinase533221.60E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.561
SRR1783600control6.595
SRR1783602moderate drought stress5.173
SRR1811619moderate drought stress5.300

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.010
DRR006520Root Summer glycyrrhizin high producing strain1.934
DRR006521Root Winter glycyrrhizin high producing strain1.386
DRR006522Root Winter glycyrrhizin high producing strain1.575
DRR006523Root Summer glycyrrhizin low producing strain3.011
DRR006524Root Summer glycyrrhizin low producing strain2.595
DRR006525Leaf Summer glycyrrhizin high producing strain0.615
DRR006526Leaf Summer glycyrrhizin high producing strain0.587

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.876
SRR2868004Drought Stress(Tissue:root)31.257
SRR2967015Control (Tissue:root)27.468

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.929
SRR9715740Leave6.086
SRR9715741Leave7.451
SRR9715739Root1.428
SRR9715742Root4.162
SRR9715743Root2.799

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.840
SRR8749028MeJA induced 9h35.287
SRR8749029MeJA induced 9h44.108
SRR8749030Uninduced63.340
SRR8749031Uninduced49.865
SRR8749032Uninduced44.706

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.114
SRR8400027Control-Root14.317

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved