Gene detail

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Gene detail information of Glyur000346s00018182.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G61590.1	1.00E-131	Protein kinase superfamily protein
NR	XP_003548706.1	0	PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max]
COG	YP_001543675.1	2.00E-18	serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
Swissprot	tr\|Q8GXZ3\|Y5102_ARATH	4.00E-117	Serine/threonine-protein kinase At5g01020
trEMBL	tr\|K7MGC1\|K7MGC1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G17273.2}

Sequence

Transcript Sequence

>Glyur000346s00018182.1
ATGAAGCAACCATCAAAGCCATGGAGGCCATTAACAACAAACTGCTGCATAACAGAGGACCAAACTATCTTTGGCAATTTCAGACTCTGCAAGCCTTCAATTACAGATATATCCAACAACAACAAGGACATTGTAGTACCAGCAGTGTCTTCATTTCATTGGCTATTTTTCTCTGATCTGAGCCATTCTTCCTCCTCATCCATTATAAGATCCAATTATGAAGATGTTATTAATGTAAAGTCTTTTGGGTCGGATTTGTATGATTTTCAGCTGAGTGAGCTGCGTGCTGTTACCCANAATTTCTCCAGCAATTTGTTGCTGGGTAAAGGTGGGTTTGGAACTGTTCATAAGGGTTATCTAGATGGCAACTTGAGGTGTGGTTTGAAAGCTCAACCTGTTGCCGCAGAGGTGATATTTCTTGGGCAGCTAAGACACCAAAATTTGGTCAAGTTGATTGGGTATTGTTGTGAAGATGAAGAACGACTACTTGTCTACCAATTCATGCCAAGGGGAAGCTTGGAGAATCACTTGTTCAGAAGCCTTGCCTTCTTGCATGGAGCTGAGAATCCAATCATTTTCCGAGACCTCAAGACTTCCAATATCTTACTTGATTCAGATTTTACAGCCAAACTGTCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAAGTCACACGTTACAACCAGAGTTATGGGCACCTATGGATATGCAGCCCCGGAATACATCTCCACAGGGCACTTGACAACAAAGAGTGATGTCTATAGCTTTGGGGTAATCCTGCTAGAAGTGCTTACAGGAAGGAGAGCAATGGACAAGAAAAAACCAAAGAATGAAAGAAACCTTGTGGATTGGTCAAGACCTTACTTGAACAATAGCAAAAGGTTGAGGTGCATTATGGATCCAAGGCTTGCAGGCCATTATTCTGTGAAGGGTGCAAAGGTGATGGCCCTTTTNGCATTGCAGTGCATAAGTTTGAATCCTAAAAACAGGCCAAGAGTGCCAACAGTTGTGGAAACTCTTGAAAGCCTGCAACAGTTCAAGGACATGGCAGTTACACGTGGACACTGGCAGCCATCACCACACTGTAAGGTGAAAATTGATCTTAGAGCAGGTGCAATCAAATAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00346	84377	86728	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.2.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04733	IRAK4	EC:2.7.11.1	NF-kappa B signaling pathway	map04064
			Toll-like receptor signaling pathway	map04620
			Toll and Imd signaling pathway	map04624
			NOD-like receptor signaling pathway	map04621
			Neurotrophin signaling pathway	map04722
			Pertussis	map05133
			Tuberculosis	map05152
			Measles	map05162
			Influenza A	map05164
			Toxoplasmosis	map05145
			Leishmaniasis	map05140
			Chagas disease (American trypanosomiasis)	map05142

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000346s00018182.1	PF00069.20	Pkinase	133	339	6.20E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.331
SRR1783600	control	0.592
SRR1783602	moderate drought stress	0.578
SRR1811619	moderate drought stress	0.482

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	16.876
SRR2868004	Drought Stress(Tissue:root)	12.239
SRR2967015	Control (Tissue:root)	16.835

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.114
SRR9715742	Root	0.327
SRR9715743	Root	0.202

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.015
SRR8749028	MeJA induced 9h	0.237
SRR8749029	MeJA induced 9h	0.160
SRR8749030	Uninduced	0.017
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.050

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	5.278
SRR8400027	Control-Root	4.470