Gene detail information of Glyur000352s00022299.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G59610.10dynamin-like 3
NRXP_004516143.10PREDICTED: dynamin-2B-like [Cicer arietinum]
Swissprottr|Q9LQ55|DRP2B_ARATH0Dynamin-2B
trEMBLtr|Q9SDX4|Q9SDX4_ASTSI0Dynamin homolog {ECO:0000313|EMBL:AAF19398.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003528251296926+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01528DNM EC:3.6.5.5 Phospholipase D signaling pathway map04072
Endocytosismap04144
Endocrine and other factor-regulated calcium reabsorptionmap04961
Synaptic vesicle cyclemap04721
Bacterial invasion of epithelial cellsmap05100


Gene Ontology

molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000352s00022299.1PF00350.18Dynamin_N412053.90E-31
Glyur000352s00022299.1PF01031.15Dynamin_M2795111.70E-27
Glyur000352s00022299.1PF00169.24PH5867104.00E-13
Glyur000352s00022299.1PF02212.13GED7478312.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.514
SRR1783600control31.630
SRR1783602moderate drought stress32.706
SRR1811619moderate drought stress32.462

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain44.741
DRR006520Root Summer glycyrrhizin high producing strain44.541
DRR006521Root Winter glycyrrhizin high producing strain41.643
DRR006522Root Winter glycyrrhizin high producing strain40.821
DRR006523Root Summer glycyrrhizin low producing strain54.507
DRR006524Root Summer glycyrrhizin low producing strain54.140
DRR006525Leaf Summer glycyrrhizin high producing strain19.862
DRR006526Leaf Summer glycyrrhizin high producing strain19.845

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.636
SRR2868004Drought Stress(Tissue:root)71.364
SRR2967015Control (Tissue:root)72.286

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.846
SRR9715740Leave38.133
SRR9715741Leave56.133
SRR9715739Root20.792
SRR9715742Root65.233
SRR9715743Root60.984

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h70.497
SRR8749028MeJA induced 9h73.383
SRR8749029MeJA induced 9h62.762
SRR8749030Uninduced43.657
SRR8749031Uninduced71.060
SRR8749032Uninduced46.657

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.246
SRR8400027Control-Root60.793

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved