Gene detail information of Glyur000352s00022306.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G33580.13.00E-61Protein kinase superfamily protein
NRXP_004509233.10PREDICTED: protein LYK5-like [Cicer arietinum]
COGYP_002759750.12.00E-12putative protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|O22808|LYK5_ARATH8.00E-73Protein LYK5 (Precursor)
trEMBLtr|D3KTZ8|D3KTZ8_LOTJA0LysM type receptor kinase {ECO:0000313|EMBL:BAI79275.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00352179744181561+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000352s00022306.1PF07714.12Pkinase_Tyr3424682.60E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.040
SRR1783600control0.040
SRR1783602moderate drought stress0.021
SRR1811619moderate drought stress0.042

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.061
DRR006522Root Winter glycyrrhizin high producing strain0.060
DRR006523Root Summer glycyrrhizin low producing strain0.122
DRR006524Root Summer glycyrrhizin low producing strain0.121
DRR006525Leaf Summer glycyrrhizin high producing strain0.547
DRR006526Leaf Summer glycyrrhizin high producing strain0.459

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.216
SRR2868004Drought Stress(Tissue:root)0.283
SRR2967015Control (Tissue:root)0.187

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.041
SRR9715740Leave0.062
SRR9715741Leave0.000
SRR9715739Root0.021
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.097
SRR8749030Uninduced0.105
SRR8749031Uninduced0.219
SRR8749032Uninduced0.219

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.208
SRR8400027Control-Root0.043

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved