Gene detail information of Glyur000361s00013167.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G26340.12.00E-131N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
NRXP_003526966.10PREDICTED: proteasome subunit beta type-5-like [Glycine max]
COGYP_006924448.13.00E-36proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Swissprottr|O24361|PSB5_SPIOL9.00E-168Proteasome subunit beta type-5 (Precursor)
trEMBLtr|I1KC47|I1KC47_SOYBN0Proteasome subunit beta type {ECO:0000256|RuleBase:RU004203}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00361102781105860-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02737PSMB5 EC:3.4.25.1 Proteasome map03050


Gene Ontology

biological_process

GO:0051603  proteolysis involved in cellular protein catabolic process


cellular_component

GO:0005839  proteasome core complex


molecular_function

GO:0004175  endopeptidase activity

GO:0004298  threonine-type endopeptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000361s00013167.1PF00227.21Proteasome992834.50E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.784
SRR1783600control46.290
SRR1783602moderate drought stress62.506
SRR1811619moderate drought stress63.618

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain76.144
DRR006520Root Summer glycyrrhizin high producing strain81.073
DRR006521Root Winter glycyrrhizin high producing strain70.122
DRR006522Root Winter glycyrrhizin high producing strain68.727
DRR006523Root Summer glycyrrhizin low producing strain69.133
DRR006524Root Summer glycyrrhizin low producing strain71.314
DRR006525Leaf Summer glycyrrhizin high producing strain33.276
DRR006526Leaf Summer glycyrrhizin high producing strain33.443

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)102.290
SRR2868004Drought Stress(Tissue:root)91.538
SRR2967015Control (Tissue:root)86.810

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave49.549
SRR9715740Leave65.143
SRR9715741Leave61.164
SRR9715739Root51.702
SRR9715742Root57.800
SRR9715743Root57.609

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h87.142
SRR8749028MeJA induced 9h59.678
SRR8749029MeJA induced 9h57.772
SRR8749030Uninduced21.434
SRR8749031Uninduced5.704
SRR8749032Uninduced11.971

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root89.425
SRR8400027Control-Root91.276

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved