Gene detail information of Glyur000364s00018049.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20410.10calmodulin-domain protein kinase 9
NRXP_003617547.10Calcium dependent protein kinase [Medicago truncatula]
COGYP_642814.11.00E-23serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q38868|CDPK9_ARATH0Calcium-dependent protein kinase 9
trEMBLtr|I1M6R1|I1M6R1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G02680.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0036496991102305-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000364s00018049.1PF00069.20Pkinase933891.80E-66
Glyur000364s00018049.1PF13499.1EF-hand_74374962.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.704
SRR1783600control10.106
SRR1783602moderate drought stress7.942
SRR1811619moderate drought stress7.693

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.289
DRR006520Root Summer glycyrrhizin high producing strain39.969
DRR006521Root Winter glycyrrhizin high producing strain71.293
DRR006522Root Winter glycyrrhizin high producing strain69.975
DRR006523Root Summer glycyrrhizin low producing strain97.312
DRR006524Root Summer glycyrrhizin low producing strain98.331
DRR006525Leaf Summer glycyrrhizin high producing strain11.832
DRR006526Leaf Summer glycyrrhizin high producing strain12.129

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.633
SRR2868004Drought Stress(Tissue:root)31.419
SRR2967015Control (Tissue:root)22.846

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave87.638
SRR9715740Leave40.692
SRR9715741Leave97.523
SRR9715739Root12.844
SRR9715742Root76.089
SRR9715743Root63.586

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.243
SRR8749028MeJA induced 9h65.638
SRR8749029MeJA induced 9h43.385
SRR8749030Uninduced82.152
SRR8749031Uninduced34.729
SRR8749032Uninduced19.941

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.112
SRR8400027Control-Root24.694

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved