Gene detail

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Gene detail information of Glyur000366s00019210.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G56960.1	0	phosphatidyl inositol monophosphate 5 kinase 4
NR	XP_003518983.2	0	PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 5-like [Glycine max]
COG	YP_004253406.1	1.00E-35	TIR protein [Odoribacter splanchnicus DSM 220712]
Swissprot	tr\|Q9M1K2\|PI5K4_ARATH	0	Phosphatidylinositol 4-phosphate 5-kinase 4
trEMBL	tr\|K7K8Q4\|K7K8Q4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G21110.2}

Sequence

Transcript Sequence

>Glyur000366s00019210.1
ATGATGGGTAAAGATAGCAGTGTTATGAAGGCTTGGGAGGCCACGGTGAGGAAGACGCAAGCGGTTGCAAAGAAGCGTGCCAACAGCATATTTGGGATGGCACATACAGAGGAAGAAGAGCACAAGGACGATCACGGTGGAGCCGACACATCGGAGATATACCACGCNGAGAAGGTTCTCCCCAATGGAGATTACTACAAGGGAGAATGGGCAGATAACTTCCCGCACGGGAAAGGAAAGTACNTGTGGACCGACGGGTGCATGTATGTTGGAGAATGGTTCAAAGGGAAAACCATGGGGAAAGGAAGGTTCACTTGGCCTTCAGGGCCTACTTATGAAGGGGAATTCAAGAGTGGTTACATGGATGGTACAGGTACATACACAGCTTCCAATGGGGATACNTATAAGGGACAATGGGTTATGAATTTGAAACATGGTCATGGTATGAAGAGTTATGCCAATGGGGATAAGTATGAAGGGGAATGGAGGAGAGGGTTGCAAGATGGGCAGGGGAAGTATCAATGGAAGGATGAGAACTATTACATTGGGGAATGGAGGAATGGGACTATTTGGGGTAAAGGGTCATTTGTTTGGAGTAATGGGAATAGGTATGATGGGTATTGGGAAGATGGTTTGCCTAAAGGGAGTGGAACTTTCAAGTGGCCTGATGGGAGTTTCTATGTGGGTAATTGGAGTAAAGATCCAAGAGATCAAAGTGGGACATACTATCCATTTGGGTCATCACAAGAGGGAAGTCTTGATTGGGATCCTCAACAAGTGTTCAATGAGTTGAGTGAGTATGAGATTTGTCCAGGGGAAAAAGTTTCAATTTTGCCATCCCAGAAGAGGCTTGCAGTTTGGAGGTCNACAAAGGGAGGGGATAGCGCTAAGCCTAGGCGAATGTCGGTGGACGGGAGGGTAAGTGTAGGGCTAGAAAGGCCATGTGATAGAATGCAATTGTGGGGTGGTGGGGAAGGTGATTTTAGTGGTAGTAGAACTCCAAATAGTGAGGGTGCTTTGGATGATGAGTTTGTAGGTTTACATATGGATGGTTCTAATCCAAGAGGGACTCAGCTTCAGACTTTGAAAGCACCAAGGAAATCAAAGAGGCAAGGAGAGACCATATGCAAAGGACACAAGAATTATGAGCTCATGCTCAATTTGCAATTGGGAATCAGGCATTCTGTTGGAAGACCTGCCCCCTCAGCATCTTTTGATCTGAAGCCTTCAGCTTTTGATTCCAAAGAGAAAGTATGGACAAGATTTCCTCCTGAAGGATCCAAATATACACCACCACATCCATCCTGTGAGTTCAAGTGGAAGGACTATTGCCCAGTAGTTTTTAGAACTCTTAGGAAGCTATTCAAGGTGGATGCAGCCGATTACATGTTATCCATATGTGGAAATGANGCCCTGCGNGAACTTTCCTCTCCTGGAAAAAGTGGNAGCTTTTTTTACTTGACCAATGATGATCGTTACATGATTAAGACGATGAAGAANGCCGAGGCTAAAGCTCTCCTAAGAATGCTTCCAGCTTATTACAATCATTTTCGAGCATTTGAAAATGCTATGGTGACAAAGTTTTATGGCCTGCATTGTGTAAAGTTAACTGGACCTACTCAGAAGAAGGTTCGATTTATCATAATGGGCAACCTCTTTTGTTCTGAATATACCATCCATAGACGTTTCGATTTAAAGGGTTCTTCNCTTGGCCGCATAACGATTAAGCCNGAGTCAGAGATTACTGAAACCACTATCCTTAAAGATCTTGATCTAAATTTTATATTTCGACTGCAACGATCTTGGTTTCAAGAATTTTGCAGGCAAATTGATAGAGACTGTGAGCTTCTAGAACAAGAGGGAATTATGGACTATAGTTTGTTGGTTGGCATTCATTTCAAAGATATATCACCNGATGGGGATCTTATTCCTGCTGGATCTCATACTCCTACTGGTGATTCAGATAGTGAAGGTACTCCCCATATTTCACGAGCAGACATGGATCAACTTCTTCTAGATCCTTCCAGGTGGGCAAGTATCAAACTGGGTGTAAATATGCCAGCAAGGGTGGAAAGGACAGTGAGAAGAAGCGATTGTGAATTACAACTTGTAGGAGAACCAATTGGGGAGTTCTATGAGGTTGTATTGTTTTTTGGCATCATAGACATACTTCAAGACTATGACATCAGCAAGAAGCTTGAGCATGCCTATAAGTCCATTCAATATGATCCAACCTCAATATCGGCCGTTGATCCGAGACAATACTCGAGGCGCTTCCGCGACTTCATATTCAGAATATTTTCTGAAGACTCTTCTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00366	32955	37590	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00889	PIP5K	EC:2.7.1.68	Inositol phosphate metabolism	map00562
			MAPK signaling pathway - yeast	map04011
			Phosphatidylinositol signaling system	map04070
			Phospholipase D signaling pathway	map04072
			Endocytosis	map04144
			Mitophagy - yeast	map04139
			Regulation of actin cytoskeleton	map04810
			Fc gamma R-mediated phagocytosis	map04666
			Choline metabolism in cancer	map05231

Gene Ontology

biological_process
GO:0046488 phosphatidylinositol metabolic process

molecular_function GO:0005524 ATP binding GO:0016307 phosphatidylinositol phosphate kinase activity GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000366s00019210.1	PF02493.15	MORN	66	88	3.30E-07
Glyur000366s00019210.1	PF02493.15	MORN	89	109	2.70E-05
Glyur000366s00019210.1	PF02493.15	MORN	112	134	0.0001
Glyur000366s00019210.1	PF02493.15	MORN	135	156	8.00E-06
Glyur000366s00019210.1	PF02493.15	MORN	158	179	2.60E-06
Glyur000366s00019210.1	PF02493.15	MORN	181	203	9.00E-06
Glyur000366s00019210.1	PF02493.15	MORN	204	225	1.80E-05
Glyur000366s00019210.1	PF01504.13	PIP5K	465	767	1.80E-80

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.031
SRR1783600	control	0.032
SRR1783602	moderate drought stress	0.016
SRR1811619	moderate drought stress	0.033

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.048
DRR006522	Root Winter glycyrrhizin high producing strain	0.046
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.000
SRR2868004	Drought Stress(Tissue:root)	0.040
SRR2967015	Control (Tissue:root)	0.066

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.001
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.017
SRR9715743	Root	0.026

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.003
SRR8749029	MeJA induced 9h	0.026
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.099
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.002
SRR8400027	Control-Root	0.003