Gene detail information of Glyur000376s00018699.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18250.11.00E-62receptor serine/threonine kinase, putative
NRXP_003619237.10Kinase-like protein [Medicago truncatula]
COGYP_001958461.11.00E-20hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH1.00E-68Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|A0A072VF38|A0A072VF38_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH40372.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00376177350178843+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000376s00018699.1PF07714.12Pkinase_Tyr2534391.90E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.039
SRR1783600control0.067
SRR1783602moderate drought stress0.055
SRR1811619moderate drought stress0.096

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.248
DRR006520Root Summer glycyrrhizin high producing strain1.264
DRR006521Root Winter glycyrrhizin high producing strain0.739
DRR006522Root Winter glycyrrhizin high producing strain0.762
DRR006523Root Summer glycyrrhizin low producing strain0.080
DRR006524Root Summer glycyrrhizin low producing strain0.040
DRR006525Leaf Summer glycyrrhizin high producing strain7.120
DRR006526Leaf Summer glycyrrhizin high producing strain7.288

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.048
SRR2868004Drought Stress(Tissue:root)0.151
SRR2967015Control (Tissue:root)0.428

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.399
SRR9715740Leave0.219
SRR9715741Leave6.311
SRR9715739Root0.000
SRR9715742Root0.010
SRR9715743Root0.045

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.992
SRR8400027Control-Root1.163

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved