Gene detail information of Glyur000406s00019725.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G52540.11.00E-130Protein kinase superfamily protein
NRXP_003543684.10PREDICTED: PTI1-like tyrosine-protein kinase At3g15890-like [Glycine max]
COGYP_004571825.18.00E-24serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9LSC2|Y3589_ARATH1.00E-165PTI1-like tyrosine-protein kinase At3g15890
trEMBLtr|I1M5U7|I1M5U7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G44280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0040699158102700-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000406s00019725.1PF00069.20Pkinase423086.40E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.036
SRR1783600control23.691
SRR1783602moderate drought stress29.099
SRR1811619moderate drought stress28.515

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.961
DRR006520Root Summer glycyrrhizin high producing strain33.260
DRR006521Root Winter glycyrrhizin high producing strain22.932
DRR006522Root Winter glycyrrhizin high producing strain22.629
DRR006523Root Summer glycyrrhizin low producing strain78.080
DRR006524Root Summer glycyrrhizin low producing strain77.704
DRR006525Leaf Summer glycyrrhizin high producing strain10.788
DRR006526Leaf Summer glycyrrhizin high producing strain10.517

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)90.248
SRR2868004Drought Stress(Tissue:root)116.507
SRR2967015Control (Tissue:root)137.758

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.234
SRR9715740Leave15.230
SRR9715741Leave23.491
SRR9715739Root16.582
SRR9715742Root26.264
SRR9715743Root25.003

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.505
SRR8749028MeJA induced 9h38.594
SRR8749029MeJA induced 9h50.384
SRR8749030Uninduced32.740
SRR8749031Uninduced45.721
SRR8749032Uninduced59.281

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.047
SRR8400027Control-Root56.054

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved