Gene detail information of Glyur000433s00026975.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G02800.24.00E-70protein kinase 2B
NRXP_006438645.13.72E-119hypothetical protein CICLE_v10031645mg [Citrus clementina]
COGYP_004407069.15.00E-10serine/threonine protein kinase with pasta sensor(s) [Verrucosispora maris AB-18-032]
Swissprottr|O49840|APK2B_ARATH1.00E-83Protein kinase 2B, chloroplastic (Precursor)
trEMBLtr|V4TJT3|V4TJT3_9ROSI1.00E-119Uncharacterized protein {ECO:0000313|EMBL:ESR51885.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00433145568150046+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000433s00026975.1PF00069.20Pkinase1012334.50E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.403
SRR1783600control1.458
SRR1783602moderate drought stress1.104
SRR1811619moderate drought stress1.148

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.544
DRR006520Root Summer glycyrrhizin high producing strain3.998
DRR006521Root Winter glycyrrhizin high producing strain0.354
DRR006522Root Winter glycyrrhizin high producing strain0.459
DRR006523Root Summer glycyrrhizin low producing strain18.460
DRR006524Root Summer glycyrrhizin low producing strain17.420
DRR006525Leaf Summer glycyrrhizin high producing strain6.999
DRR006526Leaf Summer glycyrrhizin high producing strain6.181

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.651
SRR2868004Drought Stress(Tissue:root)5.457
SRR2967015Control (Tissue:root)1.757

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.580
SRR9715740Leave20.777
SRR9715741Leave18.226
SRR9715739Root5.421
SRR9715742Root9.390
SRR9715743Root7.707

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h64.756
SRR8749028MeJA induced 9h69.919
SRR8749029MeJA induced 9h65.442
SRR8749030Uninduced34.303
SRR8749031Uninduced27.862
SRR8749032Uninduced20.264

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.179
SRR8400027Control-Root9.407

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved