Gene detail information of Glyur000434s00017209.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13690.10alpha-N-acetylglucosaminidase family / NAGLU family
NRXP_004499942.10PREDICTED: alpha-N-acetylglucosaminidase-like [Cicer arietinum]
COGYP_005009197.16.00E-83Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase [Niastella koreensis GR20-10]
trEMBLtr|K7LI90|K7LI90_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G11720.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00434293813993-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH89


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01205NAGLU EC:3.2.1.50 Glycosaminoglycan degradation map00531
Lysosomemap04142


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000434s00017209.1PF12971.2NAGLU_N521493.70E-25
Glyur000434s00017209.1PF05089.7NAGLU1654991.70E-138
Glyur000434s00017209.1PF12972.2NAGLU_C5058045.30E-91


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.908
SRR1783600control13.992
SRR1783602moderate drought stress25.980
SRR1811619moderate drought stress26.150

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.569
DRR006520Root Summer glycyrrhizin high producing strain11.741
DRR006521Root Winter glycyrrhizin high producing strain25.040
DRR006522Root Winter glycyrrhizin high producing strain24.326
DRR006523Root Summer glycyrrhizin low producing strain15.388
DRR006524Root Summer glycyrrhizin low producing strain15.251
DRR006525Leaf Summer glycyrrhizin high producing strain13.044
DRR006526Leaf Summer glycyrrhizin high producing strain13.075

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.167
SRR2868004Drought Stress(Tissue:root)42.630
SRR2967015Control (Tissue:root)45.149

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.827
SRR9715740Leave23.855
SRR9715741Leave23.515
SRR9715739Root6.842
SRR9715742Root9.954
SRR9715743Root9.312

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.055
SRR8749028MeJA induced 9h54.483
SRR8749029MeJA induced 9h28.695
SRR8749030Uninduced42.478
SRR8749031Uninduced28.415
SRR8749032Uninduced32.864

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.370
SRR8400027Control-Root28.418

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved