Gene detail information of Glyur000447s00016654.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G02305.12.00E-129Cysteine proteinases superfamily protein
NRXP_003554589.10PREDICTED: cathepsin B-like [Glycine max]
COGYP_005006029.13.00E-17Dipeptidyl-peptidase I [Niastella koreensis GR20-10]
Swissprottr|Q40143|CYSP3_SOLLC3.00E-26Cysteine proteinase 3 (Precursor)
trEMBLtr|I1NBK8|I1NBK8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00447129203132767+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01363CTSB EC:3.4.22.1 Lysosome map04142
Autophagy - animalmap04140
Apoptosismap04210
NOD-like receptor signaling pathwaymap04621
Antigen processing and presentationmap04612
Renin secretionmap04924


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0050790  regulation of catalytic activity


molecular_function

GO:0004197  cysteine-type endopeptidase activity

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000447s00016654.1PF08127.8Propeptide_C140824.20E-08
Glyur000447s00016654.1PF00112.18Peptidase_C1913012.40E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control86.864
SRR1783600control85.261
SRR1783602moderate drought stress104.765
SRR1811619moderate drought stress103.452

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain168.242
DRR006520Root Summer glycyrrhizin high producing strain158.751
DRR006521Root Winter glycyrrhizin high producing strain253.794
DRR006522Root Winter glycyrrhizin high producing strain242.348
DRR006523Root Summer glycyrrhizin low producing strain185.065
DRR006524Root Summer glycyrrhizin low producing strain177.705
DRR006525Leaf Summer glycyrrhizin high producing strain126.790
DRR006526Leaf Summer glycyrrhizin high producing strain125.556

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)135.178
SRR2868004Drought Stress(Tissue:root)149.420
SRR2967015Control (Tissue:root)174.754

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave145.415
SRR9715740Leave137.602
SRR9715741Leave171.519
SRR9715739Root66.094
SRR9715742Root91.052
SRR9715743Root76.559

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h51.036
SRR8749028MeJA induced 9h61.157
SRR8749029MeJA induced 9h36.453
SRR8749030Uninduced44.980
SRR8749031Uninduced59.156
SRR8749032Uninduced27.329

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root235.412
SRR8400027Control-Root264.560

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved