Gene detail information of Glyur000447s00016657.2 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G02305.1 | 3.00E-127 | Cysteine proteinases superfamily protein |
NR | XP_003554589.1 | 0 | PREDICTED: cathepsin B-like [Glycine max] |
COG | YP_005006029.1 | 1.00E-16 | Dipeptidyl-peptidase I [Niastella koreensis GR20-10] |
Swissprot | tr|Q40143|CYSP3_SOLLC | 4.00E-26 | Cysteine proteinase 3 (Precursor) |
trEMBL | tr|I1NBK8|I1NBK8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41120.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00447 | 158108 | 161706 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000447s00016657.2 | PF00112.18 | Peptidase_C1 | 63 | 274 | 5.30E-59 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 76.999 |
SRR1783600 | control | 77.872 |
SRR1783602 | moderate drought stress | 69.290 |
SRR1811619 | moderate drought stress | 71.079 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 165.744 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 170.615 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 265.372 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 258.300 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 107.689 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 111.163 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 114.722 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 114.051 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 45.186 |
SRR2868004 | Drought Stress(Tissue:root) | 47.630 |
SRR2967015 | Control (Tissue:root) | 59.606 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 56.044 |
SRR9715740 | Leave | 196.082 |
SRR9715741 | Leave | 63.894 |
SRR9715739 | Root | 112.166 |
SRR9715742 | Root | 29.679 |
SRR9715743 | Root | 42.798 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 21.316 |
SRR8749028 | MeJA induced 9h | 19.898 |
SRR8749029 | MeJA induced 9h | 15.566 |
SRR8749030 | Uninduced | 19.954 |
SRR8749031 | Uninduced | 22.443 |
SRR8749032 | Uninduced | 12.836 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 170.827 |
SRR8400027 | Control-Root | 191.106 |