Gene detail information of Glyur000447s00016657.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G02305.13.00E-127Cysteine proteinases superfamily protein
NRXP_003554589.10PREDICTED: cathepsin B-like [Glycine max]
COGYP_005006029.11.00E-16Dipeptidyl-peptidase I [Niastella koreensis GR20-10]
Swissprottr|Q40143|CYSP3_SOLLC4.00E-26Cysteine proteinase 3 (Precursor)
trEMBLtr|I1NBK8|I1NBK8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00447158108161706+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01363CTSB EC:3.4.22.1 Lysosome map04142
Autophagy - animalmap04140
Apoptosismap04210
NOD-like receptor signaling pathwaymap04621
Antigen processing and presentationmap04612
Renin secretionmap04924


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000447s00016657.2PF00112.18Peptidase_C1632745.30E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control76.999
SRR1783600control77.872
SRR1783602moderate drought stress69.290
SRR1811619moderate drought stress71.079

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain165.744
DRR006520Root Summer glycyrrhizin high producing strain170.615
DRR006521Root Winter glycyrrhizin high producing strain265.372
DRR006522Root Winter glycyrrhizin high producing strain258.300
DRR006523Root Summer glycyrrhizin low producing strain107.689
DRR006524Root Summer glycyrrhizin low producing strain111.163
DRR006525Leaf Summer glycyrrhizin high producing strain114.722
DRR006526Leaf Summer glycyrrhizin high producing strain114.051

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.186
SRR2868004Drought Stress(Tissue:root)47.630
SRR2967015Control (Tissue:root)59.606

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave56.044
SRR9715740Leave196.082
SRR9715741Leave63.894
SRR9715739Root112.166
SRR9715742Root29.679
SRR9715743Root42.798

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.316
SRR8749028MeJA induced 9h19.898
SRR8749029MeJA induced 9h15.566
SRR8749030Uninduced19.954
SRR8749031Uninduced22.443
SRR8749032Uninduced12.836

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root170.827
SRR8400027Control-Root191.106