Gene detail information of Glyur000480s00023782.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G70740.13.00E-135Protein kinase superfamily protein
NRXP_003532692.10PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max]
COGYP_003050487.16.00E-26serine/threonine protein kinase [Methylovorus glucosetrophus SIP3-4]
Swissprottr|Q8GYA4|CRK10_ARATH8.00E-108Cysteine-rich receptor-like protein kinase 10 (Precursor)
trEMBLtr|I1KRS6|I1KRS6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G10030.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold004801940525118+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000480s00023782.1PF07714.12Pkinase_Tyr553247.50E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.972
SRR1783600control2.956
SRR1783602moderate drought stress6.056
SRR1811619moderate drought stress5.918

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.467
DRR006520Root Summer glycyrrhizin high producing strain14.081
DRR006521Root Winter glycyrrhizin high producing strain3.671
DRR006522Root Winter glycyrrhizin high producing strain3.525
DRR006523Root Summer glycyrrhizin low producing strain35.041
DRR006524Root Summer glycyrrhizin low producing strain35.038
DRR006525Leaf Summer glycyrrhizin high producing strain12.893
DRR006526Leaf Summer glycyrrhizin high producing strain12.724

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.434
SRR2868004Drought Stress(Tissue:root)20.818
SRR2967015Control (Tissue:root)13.436

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.520
SRR9715740Leave34.994
SRR9715741Leave42.468
SRR9715739Root9.697
SRR9715742Root21.035
SRR9715743Root18.415

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.440
SRR8749028MeJA induced 9h11.643
SRR8749029MeJA induced 9h22.931
SRR8749030Uninduced29.234
SRR8749031Uninduced28.677
SRR8749032Uninduced27.266

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.056
SRR8400027Control-Root10.381

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved