Gene detail information of Glyur000480s00023803.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14700.1 | 3.00E-100 | purple acid phosphatase 3 |
| NR | XP_003635819.1 | 1.42E-164 | Purple acid phosphatase [Medicago truncatula] |
| COG | YP_004284477.1 | 6.00E-39 | putative phosphatase [Acidiphilium multivorum AIU301] |
| Swissprot | tr|Q8H129|PPA3_ARATH | 5.00E-124 | Purple acid phosphatase 3 (Precursor) |
| trEMBL | tr|G7ZUR6|G7ZUR6_MEDTR | 5.00E-165 | Purple acid phosphatase {ECO:0000313|EMBL:AES82957.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00480 | 141736 | 144541 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K14379 | ACP5 | EC:3.1.3.2 | Lysosome | map04142 |
| Osteoclast differentiation | map04380 | |||
| Rheumatoid arthritis | map05323 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000480s00023803.1 | PF00149.23 | Metallophos | 4 | 176 | 2.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.265 |
| SRR1783600 | control | 6.438 |
| SRR1783602 | moderate drought stress | 6.844 |
| SRR1811619 | moderate drought stress | 6.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.854 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.029 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.785 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.687 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.811 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 47.789 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.185 |
| SRR2967015 | Control (Tissue:root) | 31.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.357 |
| SRR9715740 | Leave | 10.972 |
| SRR9715741 | Leave | 6.836 |
| SRR9715739 | Root | 1.264 |
| SRR9715742 | Root | 2.474 |
| SRR9715743 | Root | 3.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.680 |
| SRR8749028 | MeJA induced 9h | 16.046 |
| SRR8749029 | MeJA induced 9h | 20.620 |
| SRR8749030 | Uninduced | 17.902 |
| SRR8749031 | Uninduced | 35.235 |
| SRR8749032 | Uninduced | 16.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 25.546 |
| SRR8400027 | Control-Root | 25.259 |