Gene detail information of Glyur000541s00027319.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G15730.10phospholipase D alpha 1
NRXP_004486668.10PREDICTED: phospholipase D alpha 1-like isoform X1 [Cicer arietinum]
COGYP_003981721.17.00E-33phospholipase D [Achromobacter xylosoxidans A8]
Swissprottr|O04865|PLDA1_VIGUN0Phospholipase D alpha 1
trEMBLtr|I1M5T2|I1M5T2_SOYBN0Phospholipase D {ECO:0000256|PIRNR:PIRNR036470}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005416950088671-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01115PLD1_2 EC:3.1.4.4 Glycerophospholipid metabolism map00564
Ether lipid metabolismmap00565
Ras signaling pathwaymap04014
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
Endocytosismap04144
Fc gamma R-mediated phagocytosismap04666
GnRH signaling pathwaymap04912
Glutamatergic synapsemap04724
Choline metabolism in cancermap05231


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000541s00027319.1PF00168.25C2111093.40E-09
Glyur000541s00027319.1PF00614.17PLDc3273659.10E-12
Glyur000541s00027319.1PF00614.17PLDc6566821.20E-07
Glyur000541s00027319.1PF12357.3PLD_C7277944.30E-27
Glyur000541s00027319.1PF00168.25C28059016.70E-11
Glyur000541s00027319.1PF00614.17PLDc111911579.10E-12
Glyur000541s00027319.1PF00614.17PLDc144814741.20E-07
Glyur000541s00027319.1PF12357.3PLD_C151915864.60E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control72.615
SRR1783600control71.642
SRR1783602moderate drought stress84.305
SRR1811619moderate drought stress82.487

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain110.240
DRR006520Root Summer glycyrrhizin high producing strain109.430
DRR006521Root Winter glycyrrhizin high producing strain64.976
DRR006522Root Winter glycyrrhizin high producing strain62.144
DRR006523Root Summer glycyrrhizin low producing strain65.763
DRR006524Root Summer glycyrrhizin low producing strain65.766
DRR006525Leaf Summer glycyrrhizin high producing strain38.214
DRR006526Leaf Summer glycyrrhizin high producing strain37.708

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)119.723
SRR2868004Drought Stress(Tissue:root)104.835
SRR2967015Control (Tissue:root)105.436

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave48.796
SRR9715740Leave47.869
SRR9715741Leave56.768
SRR9715739Root108.825
SRR9715742Root150.859
SRR9715743Root152.679

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h62.704
SRR8749028MeJA induced 9h60.856
SRR8749029MeJA induced 9h41.199
SRR8749030Uninduced45.259
SRR8749031Uninduced54.291
SRR8749032Uninduced38.440

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root107.222
SRR8400027Control-Root117.895

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved