Gene detail information of Glyur000550s00021767.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G02070.17.00E-153Protein kinase family protein
NRXP_004494110.10PREDICTED: wall-associated receptor kinase-like 20-like isoform X1 [Cicer arietinum]
COGYP_008089542.12.00E-23Serine/threonine protein kinase [Chthonomonas calidirosea T49]
Swissprottr|Q9LZM4|WAKLQ_ARATH0Wall-associated receptor kinase-like 20 (Precursor)
trEMBLtr|A0A072U302|A0A072U302_MEDTR0Wall-associated receptor kinase-like protein {ECO:0000313|EMBL:KEH24074.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00550134359136245-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000550s00021767.1PF13947.1GUB_WAK_bind281316.40E-09
Glyur000550s00021767.1PF00069.20Pkinase3456166.20E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.156
SRR1783600control4.235
SRR1783602moderate drought stress4.053
SRR1811619moderate drought stress3.932

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.105
DRR006520Root Summer glycyrrhizin high producing strain4.999
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain2.536
DRR006524Root Summer glycyrrhizin low producing strain2.578
DRR006525Leaf Summer glycyrrhizin high producing strain4.934
DRR006526Leaf Summer glycyrrhizin high producing strain4.991

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.571
SRR2868004Drought Stress(Tissue:root)12.002
SRR2967015Control (Tissue:root)9.692

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.937
SRR9715740Leave2.568
SRR9715741Leave3.279
SRR9715739Root3.521
SRR9715742Root7.798
SRR9715743Root7.658

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.797
SRR8749028MeJA induced 9h1.006
SRR8749029MeJA induced 9h0.511
SRR8749030Uninduced0.800
SRR8749031Uninduced1.046
SRR8749032Uninduced0.960

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.821
SRR8400027Control-Root2.859

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved