Gene detail information of Glyur000555s00023337.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G16785.10phospholipase D P1
NRXP_003546370.10PREDICTED: phospholipase D p1-like isoform X1 [Glycine max]
Swissprottr|Q9LRZ5|PLDP1_ARATH0Phospholipase D p1
trEMBLtr|I1MGP5|I1MGP5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G16270.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005554071849826+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01115PLD1_2 EC:3.1.4.4 Glycerophospholipid metabolism map00564
Ether lipid metabolismmap00565
Ras signaling pathwaymap04014
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
Endocytosismap04144
Fc gamma R-mediated phagocytosismap04666
GnRH signaling pathwaymap04912
Glutamatergic synapsemap04724
Choline metabolism in cancermap05231


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
----------


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.452
SRR1783600control5.697
SRR1783602moderate drought stress8.528
SRR1811619moderate drought stress8.548

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.949
DRR006520Root Summer glycyrrhizin high producing strain5.824
DRR006521Root Winter glycyrrhizin high producing strain23.303
DRR006522Root Winter glycyrrhizin high producing strain22.453
DRR006523Root Summer glycyrrhizin low producing strain6.895
DRR006524Root Summer glycyrrhizin low producing strain6.834
DRR006525Leaf Summer glycyrrhizin high producing strain6.983
DRR006526Leaf Summer glycyrrhizin high producing strain6.864

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.794
SRR2868004Drought Stress(Tissue:root)18.701
SRR2967015Control (Tissue:root)16.179

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.387
SRR9715740Leave7.329
SRR9715741Leave10.390
SRR9715739Root1.397
SRR9715742Root8.301
SRR9715743Root7.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.967
SRR8749028MeJA induced 9h32.330
SRR8749029MeJA induced 9h15.017
SRR8749030Uninduced22.772
SRR8749031Uninduced33.015
SRR8749032Uninduced19.719

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.336
SRR8400027Control-Root13.448

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved