Gene detail information of Glyur000556s00025912.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05590.10beta-hexosaminidase 2
NRXP_004488586.10PREDICTED: beta-hexosaminidase 2-like [Cicer arietinum]
COGYP_592568.14.00E-61beta-N-acetylhexosaminidase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|Q9SYK0|HEXO2_ARATH0Beta-hexosaminidase 2 (Precursor)
trEMBLtr|V7BX67|V7BX67_PHAVU0Beta-hexosaminidase {ECO:0000256|PIRNR:PIRNR001093}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00556122855126759+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12373HEXA_B EC:3.2.1.52 Amino sugar and nucleotide sugar metabolism map00520
Various types of N-glycan biosynthesismap00513
Glycosaminoglycan degradationmap00531
Glycosphingolipid biosynthesis - globo and isoglobo seriesmap00603
Glycosphingolipid biosynthesis - ganglio seriesmap00604
Other glycan degradationmap00511
Lysosomemap04142


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0004563  beta-N-acetylhexosaminidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000556s00025912.1PF14845.1Glycohydro_20b2411612.90E-23
Glyur000556s00025912.1PF00728.17Glyco_hydro_201825353.70E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.220
SRR1783600control13.182
SRR1783602moderate drought stress17.585
SRR1811619moderate drought stress17.300

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.350
DRR006520Root Summer glycyrrhizin high producing strain13.633
DRR006521Root Winter glycyrrhizin high producing strain3.057
DRR006522Root Winter glycyrrhizin high producing strain2.901
DRR006523Root Summer glycyrrhizin low producing strain22.350
DRR006524Root Summer glycyrrhizin low producing strain21.853
DRR006525Leaf Summer glycyrrhizin high producing strain24.368
DRR006526Leaf Summer glycyrrhizin high producing strain23.987

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.764
SRR2868004Drought Stress(Tissue:root)24.465
SRR2967015Control (Tissue:root)19.461

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.210
SRR9715740Leave12.929
SRR9715741Leave6.850
SRR9715739Root14.642
SRR9715742Root22.064
SRR9715743Root18.935

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.802
SRR8749028MeJA induced 9h7.040
SRR8749029MeJA induced 9h5.350
SRR8749030Uninduced3.140
SRR8749031Uninduced0.353
SRR8749032Uninduced2.469

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.056
SRR8400027Control-Root11.630

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved