Gene detail information of Glyur000580s00024207.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G21630.13.00E-54chitin elicitor receptor kinase 1
NRCAE02593.10SYM10 protein [Pisum sativum]
COGYP_002759750.19.00E-13putative protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|O64825|LYK4_ARATH7.00E-65LysM domain receptor-like kinase 4 (Precursor)
trEMBLtr|Q70KR5|Q70KR5_PEA0SYM10 protein {ECO:0000313|EMBL:CAE02594.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005807528877051-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000580s00024207.1PF07714.12Pkinase_Tyr3414572.20E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.026
SRR1783600control3.027
SRR1783602moderate drought stress2.738
SRR1811619moderate drought stress2.783

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.240
DRR006520Root Summer glycyrrhizin high producing strain1.209
DRR006521Root Winter glycyrrhizin high producing strain0.696
DRR006522Root Winter glycyrrhizin high producing strain0.700
DRR006523Root Summer glycyrrhizin low producing strain6.204
DRR006524Root Summer glycyrrhizin low producing strain5.981
DRR006525Leaf Summer glycyrrhizin high producing strain0.462
DRR006526Leaf Summer glycyrrhizin high producing strain0.419

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.191
SRR2868004Drought Stress(Tissue:root)3.788
SRR2967015Control (Tissue:root)3.025

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.237
SRR9715740Leave1.272
SRR9715741Leave0.148
SRR9715739Root0.959
SRR9715742Root0.841
SRR9715743Root0.898

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.635
SRR8749028MeJA induced 9h0.239
SRR8749029MeJA induced 9h0.041
SRR8749030Uninduced0.160
SRR8749031Uninduced0.122
SRR8749032Uninduced0.065

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.701
SRR8400027Control-Root0.727

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved