Gene detail information of Glyur000598s00025093.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G25220.21.00E-54Protein kinase superfamily protein
NRKEH39620.18.18E-101receptor-like kinase [Medicago truncatula]
COGYP_004222960.13.00E-15serine/threonine protein kinase [Microbacterium testaceum StLB037]
Swissprottr|Q0V7T5|Y1864_ARATH8.00E-73Probable receptor-like protein kinase At1g80640 (Precursor)
trEMBLtr|A0A072VN94|A0A072VN94_MEDTR3.00E-101Receptor-like kinase {ECO:0000313|EMBL:KEH39620.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005986905173578-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000598s00025093.1PF00069.20Pkinase1823271.40E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.747
SRR1783600control2.773
SRR1783602moderate drought stress1.364
SRR1811619moderate drought stress1.532

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.011
DRR006520Root Summer glycyrrhizin high producing strain2.966
DRR006521Root Winter glycyrrhizin high producing strain4.813
DRR006522Root Winter glycyrrhizin high producing strain4.781
DRR006523Root Summer glycyrrhizin low producing strain1.974
DRR006524Root Summer glycyrrhizin low producing strain1.693
DRR006525Leaf Summer glycyrrhizin high producing strain1.818
DRR006526Leaf Summer glycyrrhizin high producing strain1.832

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.945
SRR2868004Drought Stress(Tissue:root)4.433
SRR2967015Control (Tissue:root)4.303

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.248
SRR9715740Leave2.176
SRR9715741Leave1.505
SRR9715739Root0.833
SRR9715742Root2.062
SRR9715743Root1.948

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.362
SRR8749028MeJA induced 9h0.292
SRR8749029MeJA induced 9h0.212
SRR8749030Uninduced1.113
SRR8749031Uninduced0.491
SRR8749032Uninduced0.522

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.672
SRR8400027Control-Root10.802

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved