Gene detail information of Glyur000616s00026595.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66910.12.00E-74Protein kinase superfamily protein
NRKEH40361.10receptor-like kinase [Medicago truncatula]
COGYP_001958461.13.00E-21hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|D7SFH9|GPDL2_ARATH2.00E-78Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBLtr|A0A072VFM0|A0A072VFM0_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH40361.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006164781749544+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000616s00026595.1PF00069.20Pkinase2344095.00E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.534
SRR1783600control0.545
SRR1783602moderate drought stress0.249
SRR1811619moderate drought stress0.260

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.117
DRR006520Root Summer glycyrrhizin high producing strain0.070
DRR006521Root Winter glycyrrhizin high producing strain0.450
DRR006522Root Winter glycyrrhizin high producing strain0.654
DRR006523Root Summer glycyrrhizin low producing strain0.363
DRR006524Root Summer glycyrrhizin low producing strain0.399
DRR006525Leaf Summer glycyrrhizin high producing strain6.560
DRR006526Leaf Summer glycyrrhizin high producing strain6.373

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.942
SRR2868004Drought Stress(Tissue:root)0.892
SRR2967015Control (Tissue:root)1.402

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.764
SRR9715740Leave45.942
SRR9715741Leave53.757
SRR9715739Root0.761
SRR9715742Root2.694
SRR9715743Root1.965

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.002
SRR8749028MeJA induced 9h0.110
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.209
SRR8749031Uninduced0.019
SRR8749032Uninduced0.071

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.961
SRR8400027Control-Root1.070

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved