Gene detail information of Glyur000616s00026598.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18250.16.00E-54receptor serine/threonine kinase, putative
NRKEH40314.12.27E-135receptor-like kinase [Medicago truncatula]
COGYP_003894027.14.00E-13serine/threonine protein kinase [Methanoplanus petrolearius DSM 11571]
Swissprottr|Q9FID6|Y5392_ARATH2.00E-61Probable receptor-like protein kinase At5g39020 (Precursor)
trEMBLtr|A0A072VE73|A0A072VE73_MEDTR8.00E-136Receptor-like kinase {ECO:0000313|EMBL:KEH40314.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006165488156826+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000616s00026598.1PF00069.20Pkinase31591.10E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.250
SRR1783600control0.378
SRR1783602moderate drought stress0.052
SRR1811619moderate drought stress0.125

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.148
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain5.424
DRR006522Root Winter glycyrrhizin high producing strain4.378
DRR006523Root Summer glycyrrhizin low producing strain0.255
DRR006524Root Summer glycyrrhizin low producing strain0.253
DRR006525Leaf Summer glycyrrhizin high producing strain5.515
DRR006526Leaf Summer glycyrrhizin high producing strain5.495

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.219
SRR2868004Drought Stress(Tissue:root)0.177
SRR2967015Control (Tissue:root)0.288

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.329
SRR9715740Leave11.691
SRR9715741Leave7.250
SRR9715739Root0.408
SRR9715742Root0.533
SRR9715743Root0.787

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.037
SRR8749029MeJA induced 9h0.116
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.734
SRR8400027Control-Root0.633

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved