Gene detail information of Glyur000616s00026600.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66980.12.00E-89suppressor of npr1-1 constitutive 4
NRKEH40353.10receptor-like kinase [Medicago truncatula]
COGYP_001958461.18.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH2.00E-99Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|A0A072VG22|A0A072VG22_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH40353.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006166328666145+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000616s00026600.1PF00069.20Pkinase2935583.70E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.791
SRR1783600control1.837
SRR1783602moderate drought stress2.428
SRR1811619moderate drought stress2.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.142
DRR006520Root Summer glycyrrhizin high producing strain9.229
DRR006521Root Winter glycyrrhizin high producing strain5.500
DRR006522Root Winter glycyrrhizin high producing strain5.176
DRR006523Root Summer glycyrrhizin low producing strain42.362
DRR006524Root Summer glycyrrhizin low producing strain42.713
DRR006525Leaf Summer glycyrrhizin high producing strain8.817
DRR006526Leaf Summer glycyrrhizin high producing strain8.982

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.339
SRR2868004Drought Stress(Tissue:root)11.766
SRR2967015Control (Tissue:root)17.318

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.129
SRR9715740Leave75.781
SRR9715741Leave51.391
SRR9715739Root23.766
SRR9715742Root39.438
SRR9715743Root36.855

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.374
SRR8749028MeJA induced 9h20.195
SRR8749029MeJA induced 9h15.722
SRR8749030Uninduced34.045
SRR8749031Uninduced24.120
SRR8749032Uninduced27.610

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.308
SRR8400027Control-Root15.622

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved