Gene detail information of Glyur000616s00026607.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67000.12.00E-81Protein kinase superfamily protein
NRKEH40303.10receptor-like kinase [Medicago truncatula]
COGYP_001958461.12.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH2.00E-89Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|A0A072VFT4|A0A072VFT4_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH40303.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00616112574115004-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000616s00026607.1PF07714.12Pkinase_Tyr3045733.20E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.586
SRR1783600control0.588
SRR1783602moderate drought stress0.524
SRR1811619moderate drought stress0.603

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.554
DRR006520Root Summer glycyrrhizin high producing strain2.606
DRR006521Root Winter glycyrrhizin high producing strain2.353
DRR006522Root Winter glycyrrhizin high producing strain2.372
DRR006523Root Summer glycyrrhizin low producing strain0.288
DRR006524Root Summer glycyrrhizin low producing strain0.361
DRR006525Leaf Summer glycyrrhizin high producing strain0.161
DRR006526Leaf Summer glycyrrhizin high producing strain0.161

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.819
SRR2868004Drought Stress(Tissue:root)1.585
SRR2967015Control (Tissue:root)2.629

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.368
SRR9715740Leave1.131
SRR9715741Leave2.165
SRR9715739Root3.368
SRR9715742Root1.450
SRR9715743Root2.259

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.031
SRR8749028MeJA induced 9h0.364
SRR8749029MeJA induced 9h0.092
SRR8749030Uninduced0.497
SRR8749031Uninduced0.331
SRR8749032Uninduced0.173

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.718
SRR8400027Control-Root1.048

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved