Gene detail information of Glyur000629s00020930.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10660.11.00E-57calmodulin-domain protein kinase cdpk isoform 2
NRACC94267.10Ca2+ and calmodulin-dependent protein kinase [Sesbania rostrata]
COGYP_003995353.19.00E-26serine/threonine protein kinase with PASTA sensor(s) [Halanaerobium hydrogeniformans]
Swissprottr|A0AAR7|CCAMK_LOTJA0Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase
trEMBLtr|B2MV71|B2MV71_SESRO0Ca2+ and calmodulin-dependent protein kinase {ECO:0000313|EMBL:ACC94267.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006296336968524-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000629s00020930.1PF00069.20Pkinase122251.00E-48
Glyur000629s00020930.1PF00069.20Pkinase2282651.80E-05
Glyur000629s00020930.1PF13499.1EF-hand_73924581.60E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.397
SRR1783600control16.460
SRR1783602moderate drought stress6.614
SRR1811619moderate drought stress6.680

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.778
DRR006520Root Summer glycyrrhizin high producing strain4.894
DRR006521Root Winter glycyrrhizin high producing strain4.042
DRR006522Root Winter glycyrrhizin high producing strain4.180
DRR006523Root Summer glycyrrhizin low producing strain3.475
DRR006524Root Summer glycyrrhizin low producing strain3.272
DRR006525Leaf Summer glycyrrhizin high producing strain0.060
DRR006526Leaf Summer glycyrrhizin high producing strain0.043

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)72.519
SRR2868004Drought Stress(Tissue:root)69.529
SRR2967015Control (Tissue:root)47.624

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.947
SRR9715740Leave2.067
SRR9715741Leave15.294
SRR9715739Root7.206
SRR9715742Root8.476
SRR9715743Root8.722

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.927
SRR8749028MeJA induced 9h37.807
SRR8749029MeJA induced 9h25.062
SRR8749030Uninduced10.859
SRR8749031Uninduced13.490
SRR8749032Uninduced10.884

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.742
SRR8400027Control-Root10.187

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved