Gene detail information of Glyur000702s00024644.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76040.20calcium-dependent protein kinase 29
NRXP_003545013.10PREDICTED: calcium-dependent protein kinase 29-like isoformX1 [Glycine max]
COGYP_004963055.13.00E-26serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1]
Swissprottr|Q8RWL2|CDPKT_ARATH0Calcium-dependent protein kinase 29
trEMBLtr|I1MC08|I1MC08_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G40090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007026345870368-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000702s00024644.1PF00069.20Pkinase833416.20E-70
Glyur000702s00024644.1PF13499.1EF-hand_73894489.50E-14
Glyur000702s00024644.1PF13499.1EF-hand_74615208.90E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.679
SRR1783600control2.589
SRR1783602moderate drought stress2.490
SRR1811619moderate drought stress2.451

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.465
DRR006520Root Summer glycyrrhizin high producing strain10.248
DRR006521Root Winter glycyrrhizin high producing strain1.002
DRR006522Root Winter glycyrrhizin high producing strain0.941
DRR006523Root Summer glycyrrhizin low producing strain14.756
DRR006524Root Summer glycyrrhizin low producing strain14.592
DRR006525Leaf Summer glycyrrhizin high producing strain10.852
DRR006526Leaf Summer glycyrrhizin high producing strain10.914

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.871
SRR2868004Drought Stress(Tissue:root)15.724
SRR2967015Control (Tissue:root)16.129

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.194
SRR9715740Leave4.018
SRR9715741Leave5.108
SRR9715739Root0.295
SRR9715742Root3.784
SRR9715743Root3.638

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.336
SRR8749028MeJA induced 9h1.275
SRR8749029MeJA induced 9h5.353
SRR8749030Uninduced4.230
SRR8749031Uninduced39.200
SRR8749032Uninduced27.990

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.588
SRR8400027Control-Root5.585

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved