Gene detail

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Gene detail information of Glyur000751s00027025.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G17790.1	2.00E-94	purple acid phosphatase 17
NR	XP_004513338.1	3.56E-153	PREDICTED: purple acid phosphatase 17-like isoform X1 [Cicer arietinum]
COG	YP_007322312.1	1.00E-30	acid phosphatase [Fibrella aestuarina BUZ 2]
Swissprot	tr\|Q9SCX8\|PPA17_ARATH	3.00E-116	Purple acid phosphatase 17 (Precursor)
trEMBL	tr\|I1KQM7\|I1KQM7_SOYBN	5.00E-146	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G06090.1}

Sequence

Transcript Sequence

>Glyur000751s00027025.1
AGAACACACACACAACAAGCGTTTTTGAATCAAGTTCTTTCAATTTCAACATCATCATCTAGAGCTATGGCAGGTCTTAGTGTAAACCCCATGTTCATGTGTTTTCTCTTTGCCATTAGTTTTGGGGTTGTTCTTCATGCATCTGCAGAGCTGCAGAGATTTCCACACACCCCAAAAACTGATGGTTCTCTTAATTTCTTGGTTCTTGGTGACTGGGGAAGAAGAGGTGAATACAACCAATCTGAAGTTGCTTTCCAGATGGGGAGGGTTGGAGAGAAGCTTGACATTGACTTTGTAGTTTCAACTGGAGACAATTTCTATGATGATGGGCTAACTGGTGTTCATGATACAGCATTTGAGGATATTCTTGATCCCATGAATAACATGTTTAACAATTGTTGGCATGCAGTGTTGGGTAACCATGACTATAGGGGTGATGCAGAGGCTCAATTGAGCCCATTCCTTAGGGAAGTTGATAGCAGATGGCTTTGCTTAAGGTCTTTTATTGATCTAGAAGTGGCATTGAGGGAATCAAGAGCAAAATGGAAGTTTGTTGTAGGCCACCATGCAATTAGAAGTATTGGGCATCATGGTGATACTCAAGAACTTGTAGGCCAGCTTCTACCAATGCTTCAGGCAAACAATGTTGATTTTTACATGAATGGGCATGATCACTGTCTTGAACACATCAGTGACACAGAGAGTCCTATTCAGTTCCTGACTAGTGGGGCAGGGTCAAAGGCATGGAGAGGAGATGTTAAAGAATCCAACATAAGAGGTGTGAATTTCTTCTATGATGGACAAGGTTTCATGTCTGTGCAATTGACTCAGACAGATGCAAAGATTGAGTTCTATGATGTTTATGGCAAGGTTTTGCACAGTGTCATGTCCTCAAAGCAGCTACATTCTTCCATCTAAAGTTTAGACCCTGTACAAGATAATAGAGAGAGAAAAAAATTGATTAACAAGTCTTAGGAGAAGGATTGGTGGATTGGATTTCAAATTTTGTTCTAGTCACCAATTCTTGAAGGCATTACTTGAGCATGTATATATGTATTTTTAGAATTTTCTGGAATTGAACTTCTGATAGATGTTCAT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00751	40144	43120	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14379	ACP5	EC:3.1.3.2	Lysosome	map04142
			Osteoclast differentiation	map04380
			Rheumatoid arthritis	map05323

Gene Ontology

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000751s00027025.1	PF00149.23	Metallophos	43	204	2.60E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.234
SRR1783600	control	1.268
SRR1783602	moderate drought stress	2.063
SRR1811619	moderate drought stress	1.816

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.295
DRR006520	Root Summer glycyrrhizin high producing strain	0.233
DRR006521	Root Winter glycyrrhizin high producing strain	0.444
DRR006522	Root Winter glycyrrhizin high producing strain	0.530
DRR006523	Root Summer glycyrrhizin low producing strain	0.804
DRR006524	Root Summer glycyrrhizin low producing strain	0.786
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.411
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.806

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	157.735
SRR2868004	Drought Stress(Tissue:root)	59.250
SRR2967015	Control (Tissue:root)	67.938

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.801
SRR9715740	Leave	1.486
SRR9715741	Leave	0.497
SRR9715739	Root	3.056
SRR9715742	Root	2.218
SRR9715743	Root	2.552

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.317
SRR8749028	MeJA induced 9h	0.616
SRR8749029	MeJA induced 9h	0.327
SRR8749030	Uninduced	1.337
SRR8749031	Uninduced	1.735
SRR8749032	Uninduced	1.145

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	196.507
SRR8400027	Control-Root	418.699