Gene detail information of Glyur000762s00020830.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G26340.14.00E-134N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
NRXP_003526966.10PREDICTED: proteasome subunit beta type-5-like [Glycine max]
COGYP_004616201.13.00E-38proteasome endopeptidase complex subunit beta [Methanosalsum zhilinae DSM 4017]
Swissprottr|O24361|PSB5_SPIOL2.00E-171Proteasome subunit beta type-5 (Precursor)
trEMBLtr|I1KC47|I1KC47_SOYBN0Proteasome subunit beta type {ECO:0000256|RuleBase:RU004203}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007624002243137+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02737PSMB5 EC:3.4.25.1 Proteasome map03050


Gene Ontology

biological_process

GO:0051603  proteolysis involved in cellular protein catabolic process


cellular_component

GO:0005839  proteasome core complex


molecular_function

GO:0004175  endopeptidase activity

GO:0004298  threonine-type endopeptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000762s00020830.1PF00227.21Proteasome542341.10E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control45.797
SRR1783600control44.243
SRR1783602moderate drought stress49.621
SRR1811619moderate drought stress47.901

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain92.739
DRR006520Root Summer glycyrrhizin high producing strain87.659
DRR006521Root Winter glycyrrhizin high producing strain102.878
DRR006522Root Winter glycyrrhizin high producing strain99.328
DRR006523Root Summer glycyrrhizin low producing strain82.439
DRR006524Root Summer glycyrrhizin low producing strain80.616
DRR006525Leaf Summer glycyrrhizin high producing strain54.281
DRR006526Leaf Summer glycyrrhizin high producing strain53.304

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)195.519
SRR2868004Drought Stress(Tissue:root)177.017
SRR2967015Control (Tissue:root)150.102

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave85.100
SRR9715740Leave91.874
SRR9715741Leave92.913
SRR9715739Root75.540
SRR9715742Root77.620
SRR9715743Root77.800

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h167.418
SRR8749028MeJA induced 9h162.291
SRR8749029MeJA induced 9h147.845
SRR8749030Uninduced112.255
SRR8749031Uninduced57.492
SRR8749032Uninduced64.473

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root125.492
SRR8400027Control-Root123.502

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved