Gene detail information of Glyur000846s00019259.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G07180.23.00E-124Protein kinase superfamily protein
NRXP_006580500.10PREDICTED: serine/threonine-protein kinase At5g01020-like isoform X2 [Glycine max]
COGYP_008151634.16.00E-19hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q8GXZ3|Y5102_ARATH1.00E-126Serine/threonine-protein kinase At5g01020
trEMBLtr|I1K658|I1K658_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G36500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00846105116108937-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000846s00019259.1PF00069.20Pkinase1203025.60E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.791
SRR1783600control27.988
SRR1783602moderate drought stress11.644
SRR1811619moderate drought stress12.215

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.219
DRR006520Root Summer glycyrrhizin high producing strain20.688
DRR006521Root Winter glycyrrhizin high producing strain10.438
DRR006522Root Winter glycyrrhizin high producing strain10.332
DRR006523Root Summer glycyrrhizin low producing strain14.274
DRR006524Root Summer glycyrrhizin low producing strain14.431
DRR006525Leaf Summer glycyrrhizin high producing strain5.191
DRR006526Leaf Summer glycyrrhizin high producing strain5.072

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.342
SRR2868004Drought Stress(Tissue:root)22.213
SRR2967015Control (Tissue:root)25.798

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.030
SRR9715740Leave8.977
SRR9715741Leave3.655
SRR9715739Root5.636
SRR9715742Root12.599
SRR9715743Root8.965

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.256
SRR8749028MeJA induced 9h19.834
SRR8749029MeJA induced 9h22.399
SRR8749030Uninduced19.422
SRR8749031Uninduced13.848
SRR8749032Uninduced14.477

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.496
SRR8400027Control-Root38.860

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved