Gene detail information of Glyur000890s00019073.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56790.12.00E-79Protein kinase superfamily protein
NRKHN10329.10Proline-rich receptor-like protein kinase PERK12 [Glycine soja]
COGYP_002464516.11.00E-22PASTA sensor-containing serine/threonine protein kinase [Chloroflexus aggregans DSM 9485]
Swissprottr|Q1PEM5|PERK3_ARATH2.00E-77Proline-rich receptor-like protein kinase PERK3
trEMBLtr|K7M0I8|K7M0I8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G25724.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008902648233113+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000890s00019073.1PF07714.12Pkinase_Tyr3055632.10E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.362
SRR1783600control0.361
SRR1783602moderate drought stress1.358
SRR1811619moderate drought stress1.427

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.480
DRR006520Root Summer glycyrrhizin high producing strain0.430
DRR006521Root Winter glycyrrhizin high producing strain4.722
DRR006522Root Winter glycyrrhizin high producing strain4.615
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.046
DRR006526Leaf Summer glycyrrhizin high producing strain0.046

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.228
SRR2868004Drought Stress(Tissue:root)0.161
SRR2967015Control (Tissue:root)0.274

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.251
SRR9715740Leave0.545
SRR9715741Leave1.151
SRR9715739Root0.100
SRR9715742Root0.031
SRR9715743Root0.117

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.065
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.087
SRR8749030Uninduced0.071
SRR8749031Uninduced0.249
SRR8749032Uninduced0.026

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.681
SRR8400027Control-Root0.536

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved