Gene detail information of Glyur000913s00026134.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55260.10beta-hexosaminidase 1
NRXP_004492083.10PREDICTED: beta-hexosaminidase 1-like [Cicer arietinum]
COGYP_827776.12.00E-51beta-N-acetylhexosaminidase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|A7WM73|HEXO1_ARATH0Beta-hexosaminidase 1 (Precursor)
trEMBLtr|I1N524|I1N524_SOYBN0Beta-hexosaminidase {ECO:0000256|PIRNR:PIRNR001093}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009138162089092-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12373HEXA_B EC:3.2.1.52 Amino sugar and nucleotide sugar metabolism map00520
Various types of N-glycan biosynthesismap00513
Glycosaminoglycan degradationmap00531
Glycosphingolipid biosynthesis - globo and isoglobo seriesmap00603
Glycosphingolipid biosynthesis - ganglio seriesmap00604
Other glycan degradationmap00511
Lysosomemap04142


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0004563  beta-N-acetylhexosaminidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000913s00026134.1PF14845.1Glycohydro_20b2421738.80E-24
Glyur000913s00026134.1PF00728.17Glyco_hydro_202544659.60E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.066
SRR1783600control31.361
SRR1783602moderate drought stress16.332
SRR1811619moderate drought stress16.083

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.681
DRR006520Root Summer glycyrrhizin high producing strain16.819
DRR006521Root Winter glycyrrhizin high producing strain3.830
DRR006522Root Winter glycyrrhizin high producing strain3.834
DRR006523Root Summer glycyrrhizin low producing strain18.771
DRR006524Root Summer glycyrrhizin low producing strain18.726
DRR006525Leaf Summer glycyrrhizin high producing strain14.048
DRR006526Leaf Summer glycyrrhizin high producing strain13.894

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.266
SRR2868004Drought Stress(Tissue:root)28.617
SRR2967015Control (Tissue:root)25.527

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.398
SRR9715740Leave48.960
SRR9715741Leave36.044
SRR9715739Root9.893
SRR9715742Root25.676
SRR9715743Root23.211

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.736
SRR8749028MeJA induced 9h11.951
SRR8749029MeJA induced 9h20.172
SRR8749030Uninduced2.741
SRR8749031Uninduced4.320
SRR8749032Uninduced5.524

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.720
SRR8400027Control-Root29.448

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved