Gene detail information of Glyur000920s00028979.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G02800.27.00E-174protein kinase 2B
NRXP_003519043.20PREDICTED: protein kinase 2B, chloroplastic-like [Glycine max]
COGYP_004571825.13.00E-26serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|O49840|APK2B_ARATH0Protein kinase 2B, chloroplastic (Precursor)
trEMBLtr|I1JBN3|I1JBN3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G02340.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009208354245+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000920s00028979.1PF07714.12Pkinase_Tyr793541.80E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.261
SRR1783600control40.957
SRR1783602moderate drought stress31.760
SRR1811619moderate drought stress31.306

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain54.736
DRR006520Root Summer glycyrrhizin high producing strain54.015
DRR006521Root Winter glycyrrhizin high producing strain37.626
DRR006522Root Winter glycyrrhizin high producing strain36.265
DRR006523Root Summer glycyrrhizin low producing strain112.934
DRR006524Root Summer glycyrrhizin low producing strain112.603
DRR006525Leaf Summer glycyrrhizin high producing strain38.729
DRR006526Leaf Summer glycyrrhizin high producing strain38.898

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.029
SRR2868004Drought Stress(Tissue:root)45.672
SRR2967015Control (Tissue:root)40.564

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave112.184
SRR9715740Leave116.059
SRR9715741Leave162.698
SRR9715739Root76.757
SRR9715742Root91.803
SRR9715743Root85.823

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h92.203
SRR8749028MeJA induced 9h61.309
SRR8749029MeJA induced 9h98.196
SRR8749030Uninduced44.523
SRR8749031Uninduced43.303
SRR8749032Uninduced27.699

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.920
SRR8400027Control-Root46.939

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved