Gene detail information of Glyur000964s00027945.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58940.11.00E-110calmodulin-binding receptor-like cytoplasmic kinase 1
NRXP_004490569.10PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 1-like [Cicer arietinum]
COGYP_007298824.13.00E-25serine/threonine protein kinase [Thermoanaerobacterium thermosaccharolyticum M0795]
Swissprottr|Q9FIL7|CRCK1_ARATH9.00E-139Calmodulin-binding receptor-like cytoplasmic kinase 1
trEMBLtr|V7B8M8|V7B8M8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14232.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009643521838803+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000964s00027945.1PF07714.12Pkinase_Tyr1343951.60E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.057
SRR1783600control5.897
SRR1783602moderate drought stress3.469
SRR1811619moderate drought stress3.554

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.622
DRR006520Root Summer glycyrrhizin high producing strain7.467
DRR006521Root Winter glycyrrhizin high producing strain3.581
DRR006522Root Winter glycyrrhizin high producing strain3.348
DRR006523Root Summer glycyrrhizin low producing strain7.195
DRR006524Root Summer glycyrrhizin low producing strain6.803
DRR006525Leaf Summer glycyrrhizin high producing strain3.601
DRR006526Leaf Summer glycyrrhizin high producing strain3.670

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.489
SRR2868004Drought Stress(Tissue:root)26.932
SRR2967015Control (Tissue:root)20.904

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.702
SRR9715740Leave14.188
SRR9715741Leave17.039
SRR9715739Root2.669
SRR9715742Root5.689
SRR9715743Root5.804

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.637
SRR8749028MeJA induced 9h23.580
SRR8749029MeJA induced 9h26.151
SRR8749030Uninduced157.611
SRR8749031Uninduced44.959
SRR8749032Uninduced11.235

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.804
SRR8400027Control-Root17.392

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved