Gene detail information of Glyur000997s00033155.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G18890.11.00E-106Protein kinase superfamily protein
NRKHN45232.11.82E-175Putative receptor-like serine/threonine-protein kinase [Glycine soja]
COGYP_005068728.14.00E-16serine/threonine protein kinase [Arthrospira platensis NIES-39]
Swissprottr|Q5XF57|Y5576_ARATH4.00E-88Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBLtr|I1L196|I1L196_SOYBN1.00E-175Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06160.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009973332637792-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.10.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000997s00033155.1PF07714.12Pkinase_Tyr632151.50E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.797
SRR1783600control1.606
SRR1783602moderate drought stress0.659
SRR1811619moderate drought stress0.633

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.087
DRR006520Root Summer glycyrrhizin high producing strain0.101
DRR006521Root Winter glycyrrhizin high producing strain0.179
DRR006522Root Winter glycyrrhizin high producing strain0.206
DRR006523Root Summer glycyrrhizin low producing strain0.313
DRR006524Root Summer glycyrrhizin low producing strain0.409
DRR006525Leaf Summer glycyrrhizin high producing strain0.351
DRR006526Leaf Summer glycyrrhizin high producing strain0.404

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.587
SRR2868004Drought Stress(Tissue:root)9.275
SRR2967015Control (Tissue:root)6.073

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.871
SRR9715740Leave0.111
SRR9715741Leave0.441
SRR9715739Root2.177
SRR9715742Root1.228
SRR9715743Root2.163

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.135
SRR8749028MeJA induced 9h0.014
SRR8749029MeJA induced 9h0.038
SRR8749030Uninduced0.278
SRR8749031Uninduced0.145
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.063
SRR8400027Control-Root8.750

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved