Gene detail information of Glyur001037s00036424.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G51850.10calcium-dependent protein kinase 13
NRXP_004514214.10PREDICTED: calcium-dependent protein kinase 13-like [Cicer arietinum]
COGYP_642814.12.00E-28serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q8W4I7|CDPKD_ARATH0Calcium-dependent protein kinase 13
trEMBLtr|A0A072U0I0|A0A072U0I0_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:KEH23182.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010377787484236+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001037s00036424.1PF00069.20Pkinase673232.50E-70
Glyur001037s00036424.1PF13499.1EF-hand_73714292.10E-11
Glyur001037s00036424.1PF13499.1EF-hand_74435031.10E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.702
SRR1783600control38.454
SRR1783602moderate drought stress34.356
SRR1811619moderate drought stress34.105

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain45.975
DRR006520Root Summer glycyrrhizin high producing strain45.432
DRR006521Root Winter glycyrrhizin high producing strain22.616
DRR006522Root Winter glycyrrhizin high producing strain22.079
DRR006523Root Summer glycyrrhizin low producing strain40.907
DRR006524Root Summer glycyrrhizin low producing strain40.522
DRR006525Leaf Summer glycyrrhizin high producing strain15.511
DRR006526Leaf Summer glycyrrhizin high producing strain15.637

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.985
SRR2868004Drought Stress(Tissue:root)38.468
SRR2967015Control (Tissue:root)40.699

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.374
SRR9715740Leave18.278
SRR9715741Leave17.433
SRR9715739Root24.690
SRR9715742Root34.880
SRR9715743Root33.611

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.255
SRR8749028MeJA induced 9h17.353
SRR8749029MeJA induced 9h14.187
SRR8749030Uninduced4.258
SRR8749031Uninduced3.484
SRR8749032Uninduced4.398

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.071
SRR8400027Control-Root46.644

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved