Gene detail information of Glyur001064s00029632.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32940.10gamma vacuolar processing enzyme
NRNP_001236564.10vacuolar processing enzyme 2 precursor [Glycine max]
COGYP_004254713.13.00E-16Legumain [Odoribacter splanchnicus DSM 220712]
Swissprottr|P49044|VPE_VICSA0Vacuolar-processing enzyme (Precursor)
trEMBLtr|I1M8Z5|I1M8Z5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G10620.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010648661992502+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01369LGMN EC:3.4.22.34 Lysosome map04142
Antigen processing and presentationmap04612


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008233  peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001064s00029632.1PF01650.13Peptidase_C13553194.00E-86


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control65.689
SRR1783600control65.182
SRR1783602moderate drought stress28.217
SRR1811619moderate drought stress28.782

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain420.277
DRR006520Root Summer glycyrrhizin high producing strain408.961
DRR006521Root Winter glycyrrhizin high producing strain159.507
DRR006522Root Winter glycyrrhizin high producing strain154.308
DRR006523Root Summer glycyrrhizin low producing strain2264.756
DRR006524Root Summer glycyrrhizin low producing strain2254.375
DRR006525Leaf Summer glycyrrhizin high producing strain57.409
DRR006526Leaf Summer glycyrrhizin high producing strain54.679

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)187.960
SRR2868004Drought Stress(Tissue:root)275.277
SRR2967015Control (Tissue:root)355.360

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.468
SRR9715740Leave43.235
SRR9715741Leave43.493
SRR9715739Root34.652
SRR9715742Root74.962
SRR9715743Root60.173

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.051
SRR8749028MeJA induced 9h89.010
SRR8749029MeJA induced 9h65.589
SRR8749030Uninduced21.112
SRR8749031Uninduced42.658
SRR8749032Uninduced53.539

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root110.994
SRR8400027Control-Root115.013

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved