Gene detail information of Glyur001105s00029436.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G55830.15.00E-70Concanavalin A-like lectin protein kinase family protein
NRXP_007141356.10hypothetical protein PHAVU_008G188700g [Phaseolus vulgaris]
COGYP_003890765.13.00E-17legume lectin beta domain-containing protein [Cyanothece sp. PCC 7822]
Swissprottr|Q9LYX1|LRK82_ARATH3.00E-89L-type lectin-domain containing receptor kinase VIII.2 (Precursor)
trEMBLtr|V7B6Z1|V7B6Z1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW13350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011052576630311-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001105s00029436.1PF00139.14Lectin_legB402526.20E-54
Glyur001105s00029436.1PF00069.20Pkinase3655211.50E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control129.062
SRR1783600control127.869
SRR1783602moderate drought stress56.612
SRR1811619moderate drought stress56.670

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.319
DRR006520Root Summer glycyrrhizin high producing strain25.554
DRR006521Root Winter glycyrrhizin high producing strain33.258
DRR006522Root Winter glycyrrhizin high producing strain32.510
DRR006523Root Summer glycyrrhizin low producing strain62.392
DRR006524Root Summer glycyrrhizin low producing strain62.316
DRR006525Leaf Summer glycyrrhizin high producing strain19.582
DRR006526Leaf Summer glycyrrhizin high producing strain18.767

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.838
SRR2868004Drought Stress(Tissue:root)34.246
SRR2967015Control (Tissue:root)34.740

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.058
SRR9715740Leave22.068
SRR9715741Leave18.449
SRR9715739Root40.033
SRR9715742Root58.609
SRR9715743Root48.573

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.767
SRR8749028MeJA induced 9h0.606
SRR8749029MeJA induced 9h0.457
SRR8749030Uninduced0.168
SRR8749031Uninduced0.214
SRR8749032Uninduced0.046

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root89.046
SRR8400027Control-Root90.727

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved