Gene detail information of Glyur001186s00029880.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G18890.12.00E-139Protein kinase superfamily protein
NRXP_004507866.10PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670-like [Cicer arietinum]
COGYP_828823.11.00E-21serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q5XF57|Y5576_ARATH6.00E-119Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBLtr|C1L342|C1L342_MEDTR0Rop-interacting receptor-like cytoplasmic kinase 1 {ECO:0000313|EMBL:CAT79815.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011863524940706+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.10.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001186s00029880.1PF00069.20Pkinase653267.50E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.288
SRR1783600control2.333
SRR1783602moderate drought stress1.743
SRR1811619moderate drought stress2.185

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.405
DRR006520Root Summer glycyrrhizin high producing strain0.400
DRR006521Root Winter glycyrrhizin high producing strain53.257
DRR006522Root Winter glycyrrhizin high producing strain51.565
DRR006523Root Summer glycyrrhizin low producing strain2.966
DRR006524Root Summer glycyrrhizin low producing strain2.722
DRR006525Leaf Summer glycyrrhizin high producing strain5.324
DRR006526Leaf Summer glycyrrhizin high producing strain5.487

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.948
SRR2868004Drought Stress(Tissue:root)44.055
SRR2967015Control (Tissue:root)49.456

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.241
SRR9715740Leave4.525
SRR9715741Leave6.047
SRR9715739Root2.052
SRR9715742Root5.794
SRR9715743Root5.130

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.045
SRR8749028MeJA induced 9h8.382
SRR8749029MeJA induced 9h4.878
SRR8749030Uninduced16.917
SRR8749031Uninduced7.846
SRR8749032Uninduced10.543

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.644
SRR8400027Control-Root22.557

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved