Gene detail information of Glyur001242s00026109.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15080.10Protein kinase superfamily protein
NRNP_001235470.10serine/threonine protein kinase-like protein [Glycine max]
COGYP_007201433.16.00E-22protein kinase family protein [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q9LFP7|Y5158_ARATH0Probable receptor-like protein kinase At5g15080
trEMBLtr|C6ZRY6|C6ZRY6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G02570.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012422286227138+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001242s00026109.1PF00069.20Pkinase1344081.70E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.151
SRR1783600control35.223
SRR1783602moderate drought stress41.863
SRR1811619moderate drought stress39.196

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.879
DRR006520Root Summer glycyrrhizin high producing strain32.097
DRR006521Root Winter glycyrrhizin high producing strain50.918
DRR006522Root Winter glycyrrhizin high producing strain48.402
DRR006523Root Summer glycyrrhizin low producing strain32.474
DRR006524Root Summer glycyrrhizin low producing strain33.093
DRR006525Leaf Summer glycyrrhizin high producing strain19.261
DRR006526Leaf Summer glycyrrhizin high producing strain18.384

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.430
SRR2868004Drought Stress(Tissue:root)40.065
SRR2967015Control (Tissue:root)47.266

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.818
SRR9715740Leave28.954
SRR9715741Leave25.783
SRR9715739Root16.435
SRR9715742Root32.342
SRR9715743Root27.142

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.287
SRR8749028MeJA induced 9h25.548
SRR8749029MeJA induced 9h20.566
SRR8749030Uninduced11.225
SRR8749031Uninduced9.755
SRR8749032Uninduced7.274

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.554
SRR8400027Control-Root47.265

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved