Gene detail information of Glyur001278s00025614.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14700.1 | 5.00E-117 | purple acid phosphatase 3 |
| NR | XP_004503250.1 | 0 | PREDICTED: purple acid phosphatase 3-like [Cicer arietinum] |
| COG | YP_007545525.1 | 2.00E-44 | acid phosphatase [Glaciecola psychrophila 170] |
| Swissprot | tr|Q8VYZ2|PPA8_ARATH | 8.00E-145 | Purple acid phosphatase 8 (Precursor) |
| trEMBL | tr|G7LE88|G7LE88_MEDTR | 0 | Purple acid phosphatase family protein {ECO:0000313|EMBL:AET05619.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01278 | 35516 | 37670 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K14379 | ACP5 | EC:3.1.3.2 | Lysosome | map04142 |
| Osteoclast differentiation | map04380 | |||
| Rheumatoid arthritis | map05323 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001278s00025614.1 | PF00149.23 | Metallophos | 39 | 254 | 1.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.060 |
| SRR1783600 | control | 14.130 |
| SRR1783602 | moderate drought stress | 13.417 |
| SRR1811619 | moderate drought stress | 13.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.869 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.790 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 136.181 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 136.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 31.662 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.960 |
| SRR2967015 | Control (Tissue:root) | 4.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 67.515 |
| SRR9715740 | Leave | 89.142 |
| SRR9715741 | Leave | 59.331 |
| SRR9715739 | Root | 3.906 |
| SRR9715742 | Root | 5.307 |
| SRR9715743 | Root | 5.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.210 |
| SRR8749029 | MeJA induced 9h | 0.025 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.087 |
| SRR8749032 | Uninduced | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.168 |
| SRR8400027 | Control-Root | 9.007 |