Gene detail information of Glyur001288s00028007.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38910.10calcium-dependent protein kinase 20
NRXP_004497622.10PREDICTED: calcium-dependent protein kinase 20-like [Cicer arietinum]
COGYP_642814.19.00E-31serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q9ZV15|CDPKK_ARATH0Calcium-dependent protein kinase 20
trEMBLtr|A0A072VIE3|A0A072VIE3_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:KEH41799.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012886665371753+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001288s00028007.1PF00069.20Pkinase1614191.30E-70
Glyur001288s00028007.1PF13499.1EF-hand_74675272.20E-11
Glyur001288s00028007.1PF13499.1EF-hand_75415973.10E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.039
SRR1783600control0.020
SRR1783602moderate drought stress0.109
SRR1811619moderate drought stress0.040

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.355
DRR006520Root Summer glycyrrhizin high producing strain0.282
DRR006521Root Winter glycyrrhizin high producing strain0.305
DRR006522Root Winter glycyrrhizin high producing strain0.298
DRR006523Root Summer glycyrrhizin low producing strain0.726
DRR006524Root Summer glycyrrhizin low producing strain0.673
DRR006525Leaf Summer glycyrrhizin high producing strain0.050
DRR006526Leaf Summer glycyrrhizin high producing strain0.050

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.904
SRR2868004Drought Stress(Tissue:root)0.646
SRR2967015Control (Tissue:root)0.863

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.167
SRR9715740Leave0.226
SRR9715741Leave0.140
SRR9715739Root0.000
SRR9715742Root0.013
SRR9715743Root0.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.832
SRR8749028MeJA induced 9h2.054
SRR8749029MeJA induced 9h1.657
SRR8749030Uninduced1.970
SRR8749031Uninduced1.305
SRR8749032Uninduced1.114

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.155
SRR8400027Control-Root0.219

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved