Gene detail information of Glyur001426s00029332.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52540.1 | 2.00E-10 | Protein kinase superfamily protein |
| NR | KHG17287.1 | 1.03E-12 | hypothetical protein F383_02161 [Gossypium arboreum] |
| Swissprot | tr|Q9LSC2|Y3589_ARATH | 5.00E-12 | PTI1-like tyrosine-protein kinase At3g15890 |
| trEMBL | tr|W9RSD0|W9RSD0_9ROSA | 2.00E-12 | PTI1-like tyrosine-protein kinase {ECO:0000313|EMBL:EXB67279.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01426 | 31101 | 33909 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.027 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.163 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.628 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.551 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.021 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.673 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.936 |
| SRR2967015 | Control (Tissue:root) | 3.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.057 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.077 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.032 |
| SRR8749032 | Uninduced | 0.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |