Gene detail information of Glyur001568s00034354.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10660.12.00E-30calmodulin-domain protein kinase cdpk isoform 2
NRKHN17436.11.03E-39Calcium-dependent protein kinase SK5 [Glycine soja]
COGYP_004582129.19.00E-08serine/threonine protein kinase [Frankia symbiont of Datisca glomerata]
Swissprottr|P28583|CDPK_SOYBN1.00E-40Calcium-dependent protein kinase SK5
trEMBLtr|I1K557|I1K557_SOYBN4.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33240.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold015684848664337+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001568s00034354.1PF00069.20Pkinase10902.70E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.366
SRR1783600control1.680
SRR1783602moderate drought stress3.706
SRR1811619moderate drought stress2.039

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.075
DRR006520Root Summer glycyrrhizin high producing strain3.318
DRR006521Root Winter glycyrrhizin high producing strain5.941
DRR006522Root Winter glycyrrhizin high producing strain6.556
DRR006523Root Summer glycyrrhizin low producing strain2.982
DRR006524Root Summer glycyrrhizin low producing strain2.137
DRR006525Leaf Summer glycyrrhizin high producing strain1.154
DRR006526Leaf Summer glycyrrhizin high producing strain1.269

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.493
SRR2868004Drought Stress(Tissue:root)2.319
SRR2967015Control (Tissue:root)2.992

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.557
SRR9715740Leave0.756
SRR9715741Leave1.018
SRR9715739Root0.750
SRR9715742Root1.080
SRR9715743Root0.972

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.725
SRR8749028MeJA induced 9h0.439
SRR8749029MeJA induced 9h0.916
SRR8749030Uninduced0.638
SRR8749031Uninduced0.478
SRR8749032Uninduced1.296

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.965
SRR8400027Control-Root0.741

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved