Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT5G43380.1	2.00E-105	type one serine/threonine protein phosphatase 6
NR	XP_003626624.1	3.76E-155	Serine/threonine protein phosphatase PP1 [Medicago truncatula]
COG	YP_008797523.1	2.00E-30	protein phosphatase [Candidatus Caldiarchaeum subterraneum]
Swissprot	tr\|P48489\|PP1_ORYSJ	2.00E-135	Serine/threonine-protein phosphatase PP1
trEMBL	tr\|Q1STP0\|Q1STP0_MEDTR	2.00E-155	Serine/threonine-protein phosphatase {ECO:0000256\|RuleBase:RU004273}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold01584	56696	57575	-

Gene family	subfamily
--	--

KO	Enzyme	Enzyme ID	pathway	mapID
K06269	PPP1C	EC:3.1.3.16	mRNA surveillance pathway	map03015
			Hippo signaling pathway	map04390
			cAMP signaling pathway	map04024
			cGMP - PKG signaling pathway	map04022
			Meiosis - yeast	map04113
			Oocyte meiosis	map04114
			Focal adhesion	map04510
			Regulation of actin cytoskeleton	map04810
			Platelet activation	map04611
			Insulin signaling pathway	map04910
			Oxytocin signaling pathway	map04921
			Adrenergic signaling in cardiomyocytes	map04261
			Vascular smooth muscle contraction	map04270
			Dopaminergic synapse	map04728
			Long-term potentiation	map04720
			Inflammatory mediator regulation of TRP channels	map04750
			Proteoglycans in cancer	map05205
			Amphetamine addiction	map05031
			Alcoholism	map05034
			Insulin resistance	map04931
			Herpes simplex infection	map05168

molecular_function
GO:0016787 hydrolase activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001584s00033865.1	PF00149.23	Metallophos	52	220	5.60E-37

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.100
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.000
SRR8400027	Control-Root	0.006