Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT5G43380.1	1.00E-131	type one serine/threonine protein phosphatase 6
NR	KHN00296.1	0	Serine/threonine-protein phosphatase PP1 [Glycine soja]
COG	YP_004458109.1	1.00E-28	metallophosphoesterase [Acidianus hospitalis W1]
Swissprot	tr\|P48489\|PP1_ORYSJ	4.00E-166	Serine/threonine-protein phosphatase PP1
trEMBL	tr\|I1L7I0\|I1L7I0_SOYBN	0	Serine/threonine-protein phosphatase {ECO:0000256\|RuleBase:RU004273}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold02126	14166	23310	-

Gene family	subfamily
--	--

KO	Enzyme	Enzyme ID	pathway	mapID
K06269	PPP1C	EC:3.1.3.16	mRNA surveillance pathway	map03015
			Hippo signaling pathway	map04390
			cAMP signaling pathway	map04024
			cGMP - PKG signaling pathway	map04022
			Meiosis - yeast	map04113
			Oocyte meiosis	map04114
			Focal adhesion	map04510
			Regulation of actin cytoskeleton	map04810
			Platelet activation	map04611
			Insulin signaling pathway	map04910
			Oxytocin signaling pathway	map04921
			Adrenergic signaling in cardiomyocytes	map04261
			Vascular smooth muscle contraction	map04270
			Dopaminergic synapse	map04728
			Long-term potentiation	map04720
			Inflammatory mediator regulation of TRP channels	map04750
			Proteoglycans in cancer	map05205
			Amphetamine addiction	map05031
			Alcoholism	map05034
			Insulin resistance	map04931
			Herpes simplex infection	map05168

molecular_function
GO:0016787 hydrolase activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002126s00036412.1	PF00149.23	Metallophos	59	213	5.20E-30

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.027
DRR006520	Root Summer glycyrrhizin high producing strain	10.559
DRR006521	Root Winter glycyrrhizin high producing strain	10.217
DRR006522	Root Winter glycyrrhizin high producing strain	10.395
DRR006523	Root Summer glycyrrhizin low producing strain	17.970
DRR006524	Root Summer glycyrrhizin low producing strain	18.676
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.010
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.509

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	21.497
SRR8400027	Control-Root	21.558