Gene detail information of Glyur002269s00032426.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61540.1 | 6.00E-142 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| NR | XP_004499624.1 | 0 | PREDICTED: probable isoaspartyl peptidase/L-asparaginase 3-like [Cicer arietinum] |
| COG | YP_003126168.1 | 4.00E-50 | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase [Chitinophaga pinensis DSM 2588] |
| Swissprot | tr|Q56W64|ASPG3_ARATH | 0 | Isoaspartyl peptidase/L-asparaginase 3 subunit beta (Precursor) |
| trEMBL | tr|G7IVL2|G7IVL2_MEDTR | 0 | Isoaspartyl peptidase/L-asparaginase {ECO:0000313|EMBL:AES68431.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02269 | 40357 | 44637 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01444 | AGA, aspG | EC:3.5.1.26 | Other glycan degradation | map00511 |
| Lysosome | map04142 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002269s00032426.1 | PF01112.13 | Asparaginase_2 | 20 | 336 | 9.80E-81 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.789 |
| SRR1783600 | control | 4.632 |
| SRR1783602 | moderate drought stress | 5.345 |
| SRR1811619 | moderate drought stress | 5.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.753 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.136 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.269 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.794 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.162 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.452 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.457 |
| SRR2868004 | Drought Stress(Tissue:root) | 18.018 |
| SRR2967015 | Control (Tissue:root) | 17.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.273 |
| SRR9715740 | Leave | 14.851 |
| SRR9715741 | Leave | 15.722 |
| SRR9715739 | Root | 7.697 |
| SRR9715742 | Root | 6.866 |
| SRR9715743 | Root | 7.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.126 |
| SRR8749028 | MeJA induced 9h | 7.070 |
| SRR8749029 | MeJA induced 9h | 6.353 |
| SRR8749030 | Uninduced | 3.255 |
| SRR8749031 | Uninduced | 2.225 |
| SRR8749032 | Uninduced | 2.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.794 |
| SRR8400027 | Control-Root | 19.202 |