Gene detail information of Glyur003510s00042075.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G66910.1 | 8.00E-99 | Protein kinase superfamily protein |
NR | XP_004498292.1 | 0 | PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] |
COG | YP_001958461.1 | 7.00E-25 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
Swissprot | tr|D7SFH9|GPDL2_ARATH | 2.00E-103 | Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor) |
trEMBL | tr|G7I982|G7I982_MEDTR | 0 | Receptor-like kinase {ECO:0000313|EMBL:AES59902.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold03510 | 4446 | 7283 | + |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:1.9.1 |
KEGG pathway
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur003510s00042075.1 | PF13947.1 | GUB_WAK_bind | 31 | 100 | 5.10E-08 |
Glyur003510s00042075.1 | PF00069.20 | Pkinase | 293 | 558 | 4.10E-45 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.392 |
SRR1783600 | control | 0.237 |
SRR1783602 | moderate drought stress | 0.111 |
SRR1811619 | moderate drought stress | 0.065 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.881 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.818 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.451 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.577 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 1.273 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 1.439 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.662 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.193 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 1.654 |
SRR2868004 | Drought Stress(Tissue:root) | 3.621 |
SRR2967015 | Control (Tissue:root) | 1.536 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 24.141 |
SRR9715740 | Leave | 42.116 |
SRR9715741 | Leave | 36.263 |
SRR9715739 | Root | 0.140 |
SRR9715742 | Root | 0.431 |
SRR9715743 | Root | 0.334 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 4.139 |
SRR8749028 | MeJA induced 9h | 7.618 |
SRR8749029 | MeJA induced 9h | 7.233 |
SRR8749030 | Uninduced | 1.554 |
SRR8749031 | Uninduced | 0.571 |
SRR8749032 | Uninduced | 1.588 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 0.334 |
SRR8400027 | Control-Root | 0.597 |