Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur003631s00040654.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21980.1	2.00E-26	phosphatidylinositol-4-phosphate 5-kinase 1
NR	XP_010497740.1	1.52E-31	PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1-like, partial [Camelina sativa]
Swissprot	tr\|Q56YP2\|PI5K1_ARATH	5.00E-29	Phosphatidylinositol 4-phosphate 5-kinase 1
trEMBL	tr\|I1KBS0\|I1KBS0_SOYBN	3.00E-30	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G16710.1}

Sequence

Transcript Sequence

>Glyur003631s00040654.1
CTCAGTTTTTTCTTTAGTACCTCACTTTAATTTTCTGTCTCTCTCTCTCCCCTCTCAAACGCACACTTTTTTTTTTCTTTTCATTCTTCTCTGTGCTCTTCCCATAAACGCGCACACAGAGAAAAGAATATCTGAAGAGAGGGAGCAGTGCACCGCTTGAAGAGAGGAAGACGGAGCTCCGGGCTCCTTCAGGAGCTGTGAACGGCGGCGGCGAGAACAGAGGGAGAGGGAAGGGGATTCCGGGAAGCTCGAGGTCGACCTCGATCGCGGATGAAGGAGTGGCAGCCGCGATCGTTTGTGACCGTGCAAATGGAAGCCGCACTTGTGGTGGTGGTGGACGACGGACGGCTTCGGACGACGCGGCGGAGAAGTAAACGAAGGTGGCTCGAAACGGCAGTGGCAACACCACAAAACGTTGCTGCAGCATCAACAACTGAACAATCCCAGACCACATTCTCAGACTCATTCTCAAATCAAATAGATATTGGCGGTAATGGTGAGTCCGAAAATGGTGGACAAGGTTGTGGTGGGGTGTTGCAGCGCAAGAGGAGTCCCTGTTGGACTCTTAATGGTGGTGAGGTCAAGAAGCTTGGTCAAACTGTCTCCAAGGGACATCAAAATTATGATCTCACGGTTACTCTCCAACTGGGTATGAGTTACAGTGCTGGCATGTATGTTTCCATTGTGAGAGAGCTTAGGCCGGGGGATTTTGATCCCAAGGAGAAGTTTTGGATGAGATTTGCACCTCCTCACCAGTCATTGGACTTCAAGTGGAAAGACTACTGTCTGGTGTTAACAATTCTGGCTTTCCTTGGAAGCGTGACCAATTGCCTGACCAATTGCCATGAGTTGATGTGTTCCTCTAATCAAATTGGGTTCAATCAAAGAATCTTAAAGCTCATCTTGCACAGTTTTTCTGGAGTCCTCAACAAAAGGGACAATATAGGGGTGCAGTCTTACTTCACCAAATGGTGGAGTACCATTGGGTGCAAGGATGTTGCTGATCCAATAGTAGAGGCTGCACATTCTGCCATATTTTTTAATCATGTTTTTAAGTTGAGTGCAAATATCTATTTGGCATTAATATGTTTTGCAATTGACATTTTTCCTATTGGATTGATTTATTTTCTCAAGAGTGGAATTTTCGGAACAAGCTCAATAATTGGTTTTGCGTTTGTGTGTTTTGCGTTTGTGTCACCCTTTTGCTGTAGCATTAGACAAGTTATGCCTGTTGAAGTGTACTTCACTGTTGAATCTGCGGGTGCATGTCGATAGTCAATGTAGATCTTTTGTATAGAGAAATAAATGACGCAGTGTTTCTGCAAGAATGTATTAATCATCACCACACTTCCATTTAATCTGAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold03631	8452	12535	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00889	PIP5K	EC:2.7.1.68	Inositol phosphate metabolism	map00562
			MAPK signaling pathway - yeast	map04011
			Phosphatidylinositol signaling system	map04070
			Phospholipase D signaling pathway	map04072
			Endocytosis	map04144
			Mitophagy - yeast	map04139
			Regulation of actin cytoskeleton	map04810
			Fc gamma R-mediated phagocytosis	map04666
			Choline metabolism in cancer	map05231

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.159
SRR1783600	control	3.802
SRR1783602	moderate drought stress	9.357
SRR1811619	moderate drought stress	8.718

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.081
DRR006520	Root Summer glycyrrhizin high producing strain	6.781
DRR006521	Root Winter glycyrrhizin high producing strain	8.533
DRR006522	Root Winter glycyrrhizin high producing strain	8.323
DRR006523	Root Summer glycyrrhizin low producing strain	2.421
DRR006524	Root Summer glycyrrhizin low producing strain	2.243
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.588
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.724

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	6.450
SRR2868004	Drought Stress(Tissue:root)	4.151
SRR2967015	Control (Tissue:root)	6.502

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.274
SRR9715740	Leave	1.521
SRR9715741	Leave	2.967
SRR9715739	Root	0.267
SRR9715742	Root	1.575
SRR9715743	Root	1.568

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.031
SRR8749028	MeJA induced 9h	7.911
SRR8749029	MeJA induced 9h	5.501
SRR8749030	Uninduced	2.514
SRR8749031	Uninduced	1.341
SRR8749032	Uninduced	3.995

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	17.240
SRR8400027	Control-Root	15.163